RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 GSDMCQ9BYG8 508 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 SIDT1Q9NXL6 827 aaKnown RBP13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 ACSL5Q9ULC5 683 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 ING4Q9UNL4 249 aa13.44□□□□□ -0.26
SFSWAP-201ENST00000261674 H3BSH0 61 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 PSMD9O00233 223 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 MBTPS2O43462 519 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SLC19A2O60779 497 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 IRF4Q15306 451 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SFXN4Q6P4A7 337 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 LYPD4Q6UWN0 246 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 RPLP0P6Q8NHW5 317 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF671Q8TAW3 534 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 LCN9Q8WX39 176 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 GCDHQ92947 438 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 CALML5Q9NZT1 146 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SEC14L5O43304 696 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ICMTO60725 284 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 CRYZL1O95825 349 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 POU3F3P20264 500 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 NAA10P41227 235 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 FGFBP1Q14512 234 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 MLC1Q15049 377 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 DECR1Q16698 335 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM52BQ4KMG9 183 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 FRRS1Q6ZNA5 592 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 CDK20Q8IZL9 346 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 OR52N1Q8NH53 320 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 HMGB4Q8WW32 186 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 NDC1Q9BTX1 674 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 CACNG6Q9BXT2 260 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ISYNA1Q9NPH2 558 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 BRD7Q9NPI1 651 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 PHPT1Q9NRX4 125 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 K7EQS6 105 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SSNA1O43805 119 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 FZD7O75084 574 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SCO1O75880 301 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ZGLP1P0C6A0 271 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 AK4P27144 223 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TRA2BP62995 288 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 METAP1DQ6UB28 335 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ADAMTSL4Q6UY14 1074 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM64Q6YI46 380 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF836Q6ZNA1 936 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 MEPCEQ7L2J0 689 aaKnown RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 RTL10Q7L3V2 364 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 GJD3Q8N144 294 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 OR4D9Q8NGE8 314 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ELSPBP1Q96BH3 223 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 OMA1Q96E52 524 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 NECAB3Q96P71 396 aaPredicted RBP13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ARHGDIGQ99819 225 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 SOSTQ9BQB4 213 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 NIPAL2Q9H841 368 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 POLHQ9Y253 713 aa13.43□□□□□ -0.26
SFSWAP-201ENST00000261674 TEX13CA0A0J9YWL9 993 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 SYT5O00445 386 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 MT-ND4P03905 459 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ERGP11308 486 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CXCL3P19876 107 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 NT5EP21589 574 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 UBXN2BQ14CS0 331 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ACSM3Q53FZ2 586 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 HBMQ6B0K9 141 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 WDR88Q6ZMY6 472 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ZNF433Q8N7K0 673 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 OR5M3Q8NGP4 307 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ZMYND19Q96E35 227 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 DPCDQ9BVM2 203 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CHIAQ9BZP6 476 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 FOXQ1Q9C009 403 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 MTHFD2LQ9H903 347 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ASB6Q9NWX5 421 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 AK6Q9Y3D8 172 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CACNB4O00305 520 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 PPP1R3DO95685 299 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 PEPDP12955 493 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 DRD3P35462 400 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CRMP1Q14194 572 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 CLPPQ16740 277 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 MRPL2Q5T653 305 aaKnown RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 SFRP4Q6FHJ7 346 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 LRRC28Q86X40 367 aaPredicted RBP13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 NRROSQ86YC3 692 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 OR4C6Q8NH72 309 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 ABHD4Q8TB40 342 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 GHSRQ92847 366 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 PTP4A1Q93096 173 aa13.42□□□□□ -0.26
SFSWAP-201ENST00000261674 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms