RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 AKR1C2P52895 323 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UBE2IP63279 158 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SORDQ00796 357 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 AKR1C1Q04828 323 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 KRT33BQ14525 404 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 FAM26DQ5JW98 314 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UBE2NLQ5JXB2 153 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MANEAQ5SRI9 462 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 C11orf88Q6PI97 169 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SLCO4C1Q6ZQN7 724 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 CFAP206Q8IYR0 622 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 C17orf47Q8NEP4 570 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 FBXO22Q8NEZ5 403 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 OR13C5Q8NGS8 318 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 LGALS14Q8TCE9 139 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SEPT5Q99719 369 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TIMP4Q99727 224 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ENKD1Q9H0I2 346 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PIGMQ9H3S5 423 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 DMRT3Q9NQL9 472 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MED17Q9NVC6 651 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 P2RX2Q9UBL9 471 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TRPC4Q9UBN4 977 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 DPP7Q9UHL4 492 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ICKQ9UPZ9 632 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 OR10H1Q9Y4A9 318 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 DOCK6Q96HP0 2047 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TMEM218A2RU14 115 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 J3QLW9 94 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 GATCO43716 136 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SC5DO75845 299 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 OLFM2O95897 454 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SLC16A8O95907 504 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 GP1BAP07359 652 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UCHL1P09936 223 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 RPA2P15927 270 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MGMTP16455 207 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ZNF19P17023 458 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TYRP1P17643 537 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PPP2R1BP30154 601 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ATP5C1P36542 298 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 RANBP2P49792 3224 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 NR0B1P51843 470 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TLE2Q04725 743 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PLBD1Q6P4A8 553 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UQCC3Q6UW78 93 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 RPTNQ6XPR3 784 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 RFLNAQ6ZTI6 216 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PGAP1Q75T13 922 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 CHST9Q7L1S5 443 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SP7Q8TDD2 431 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 BRIX1Q8TDN6 353 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ZFPM2Q8WW38 1151 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 OR5P2Q8WZ92 322 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SLC25A28Q96A46 364 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 UROC1Q96N76 676 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MS4A4EQ96PG1 132 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 C19orf43Q9BQ61 176 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MED20Q9H944 212 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TAS2R10Q9NYW0 307 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 FOXE1O00358 373 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 LCMT2O60294 686 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 NDUFB6O95139 128 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 S100A8P05109 93 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ALPPL2P10696 532 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 CORO1AP31146 461 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PTGFRP43088 359 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SNRPEP62304 92 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MEF2AQ02078 507 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SLBPQ14493 270 aaKnown RBP eCLIP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 DCAF12L2Q5VW00 463 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 CRTC1Q6UUV9 634 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MOB3CQ70IA8 216 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MRPL10Q7Z7H8 261 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 GID4Q8IVV7 300 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PIGXQ8TBF5 258 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 GHSRQ92847 366 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 MRPL48Q96GC5 212 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 SCLYQ96I15 445 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 C4orf36Q96KX1 117 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 CACYBPQ9HB71 228 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ZNF334Q9HCZ1 680 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 TMEM138Q9NPI0 162 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PRDM9Q9NQV7 894 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 ZFP57Q9NU63 452 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 C14orf105Q9NVL8 296 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 AK6Q9Y3D8 172 aaKnown RBP6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PLXNB3Q9ULL4 1909 aa6.72□□□□□ -1.33
CSDE1-201ENST00000261443 PLXND1Q9Y4D7 1925 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 TRAV1-2A0A0B4J238 106 aa6.71□□□□□ -1.33
CSDE1-201ENST00000261443 ANKRD20A5PA0PJZ0 165 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms