RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PELOQ9BRX2 385 aaKnown RBP10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 DPH7Q9BTV6 452 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 PLA2G12AQ9BZM1 189 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 LDAHQ9H6V9 325 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 SLAMF7Q9NQ25 335 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 CLEC1BQ9P126 229 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 ENTPD4Q9Y227 616 aa10.05□□□□□ -0.8
CHRNA1-201ENST00000261007 TICRRQ7Z2Z1 1910 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 OR6C65A6NJZ3 312 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 HMGN4O00479 90 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 GSTZ1O43708 216 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SSNA1O43805 119 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 FZD7O75084 574 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 UBL3O95164 117 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 TGM6O95932 706 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SERPIND1P05546 499 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 HIST1H1TP22492 207 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 GIFP27352 417 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 RPS15AP62244 130 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 YPEL5P62699 121 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 MRM1Q6IN84 353 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 ZNF425Q6IV72 752 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 RGS7BPQ6MZT1 257 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 ABHD17CQ6PCB6 329 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 C3P1Q6ZMU1 363 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SHFQ7M4L6 423 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 NLRC3Q7RTR2 1065 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SIAH3Q8IW03 269 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SAMD14Q8IZD0 417 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 MMP21Q8N119 569 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 FTMTQ8N4E7 242 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 OR56A1Q8NGH5 318 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 OR52H1Q8NGJ2 320 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 OR6M1Q8NGM8 313 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 OR8D4Q8NGM9 314 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 ZFPM2Q8WW38 1151 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 GIMAP1Q8WWP7 306 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 YIPF5Q969M3 257 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 AHCYL2Q96HN2 611 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 LINC00052Q96N35 136 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 BBS4Q96RK4 519 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 XKR8Q9H6D3 395 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 EGLN3Q9H6Z9 239 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 SLC6A20Q9NP91 592 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 IL20Q9NYY1 176 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 HCN3Q9P1Z3 774 aa10.04□□□□□ -0.8
CHRNA1-201ENST00000261007 LRRC72A6NJI9 287 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 A8MXK9 166 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 G3V3Q6 166 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 MAN2B1O00754 1011 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 CTDSPLO15194 276 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 SLC31A1O15431 190 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 ERI3O43414 337 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 HNRNPA2B1P22626 353 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 CALCRP30988 508 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 RPS7P62081 194 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 CRYZQ08257 329 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 KIR2DS3Q14952 304 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 CDC73Q6P1J9 531 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 RRM2BQ7LG56 351 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 KLBQ86Z14 1044 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 GJD3Q8N144 294 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 FAM71CQ8NEG0 241 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 OR4F15Q8NGB8 312 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 OR2T35Q8NGX2 323 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 LCN9Q8WX39 176 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 OSTF1Q92882 214 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 AMDHD1Q96NU7 426 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 TREX2Q9BQ50 279 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 WFDC6Q9BQY6 131 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 SLC6A15Q9H2J7 730 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 FGF22Q9HCT0 170 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 BCL2L10Q9HD36 194 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 TEX10Q9NXF1 929 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 BABAM2Q9NXR7 383 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 TMEM5Q9Y2B1 443 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 GPR52Q9Y2T5 361 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 URADA6NGE7 173 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 OR52A4PA6NMU1 304 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 J3QRE1 110 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 SURF4O15260 269 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 PEX14O75381 377 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 EGFP01133 1207 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 CSNK2A2P19784 350 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 COL9A1P20849 921 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 ATP5A1P25705 553 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 MAT2AP31153 395 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 STAT5AP42229 794 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 BLVRAP53004 296 aa10.03□□□□□ -0.8
CHRNA1-201ENST00000261007 NUBP1P53384 320 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms