RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LAPTM4BQ86VI4 370 aa25.45■■□□□ 1.66
CCM2-201ENST00000258781 PRSS58Q8IYP2 241 aa25.45■■□□□ 1.66
CCM2-201ENST00000258781 RNF31Q96EP0 1072 aa25.45■■□□□ 1.66
CCM2-201ENST00000258781 SLC24A3Q9HC58 644 aa25.45■■□□□ 1.66
CCM2-201ENST00000258781 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.45■■□□□ 1.66
CCM2-201ENST00000258781 TMX2-CTNND1H3BSU7 103 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 PTHP01270 115 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 CLEC12AQ5QGZ9 265 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 RNLSQ5VYX0 342 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 RPL13AP3Q6NVV1 102 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 FAM71CQ8NEG0 241 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 OR4Q3Q8NH05 313 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 TMEM80Q96HE8 168 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 LMF1Q96S06 567 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 DPH1Q9BZG8 443 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 COPS7AQ9UBW8 275 aa25.44■■□□□ 1.66
CCM2-201ENST00000258781 C2orf92A0A1B0GVN3 265 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 OR6C76A6NM76 312 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 SNTNA6NMZ2 147 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 M0R082 166 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 SLC22A1O15245 554 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 SCRG1O75711 98 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 MAKP20794 623 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 AQP6Q13520 282 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 EBPQ15125 230 aaKnown RBP25.43■■□□□ 1.66
CCM2-201ENST00000258781 ULK3Q6PHR2 472 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 OR2T33Q8NG76 320 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 OR1N1Q8NGS0 311 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 STT3BQ8TCJ2 826 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 BPIFA2Q96DR5 249 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 C20orf141Q9NUB4 165 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 RPS6KB2Q9UBS0 482 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 PCNX2A6NKB5 2137 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 LRP3O75074 770 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 BCL10O95999 233 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 HMGN1P05114 100 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 HBQ1P09105 142 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 CD36P16671 472 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 ZFP36L1Q07352 338 aaKnown RBP25.43■■□□□ 1.66
CCM2-201ENST00000258781 TMEM44Q2T9K0 475 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 NKAIN1Q4KMZ8 207 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 ALG10BQ5I7T1 473 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 FNDC7Q5VTL7 733 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 SLC30A6Q6NXT4 461 aa25.43■■□□□ 1.66
CCM2-201ENST00000258781 BCDIN3DQ7Z5W3 292 aaKnown RBP25.43■■□□□ 1.66
CCM2-201ENST00000258781 KDM4EB2RXH2 506 aaPredicted RBP25.42■■□□□ 1.66
CCM2-201ENST00000258781 SURF4O15260 269 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 PRODHO43272 600 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 ONECUT2O95948 504 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 ADRA2AP08913 450 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 PTNP21246 168 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 CSTF2P33240 577 aaKnown RBP eCLIP25.42■■□□□ 1.663e-8■■■■■ 39.8
CCM2-201ENST00000258781 OCA2Q04671 838 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 HLA-DQA1Q5Y7H0 255 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 PWWP2BQ6NUJ5 590 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 LINC00114Q6XXX2 140 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 C9orf40Q8IXQ3 194 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 FANK1Q8TC84 345 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 SAMD8Q96LT4 415 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 MRPS18AQ9NVS2 196 aaKnown RBP25.42■■□□□ 1.66
CCM2-201ENST00000258781 OCIAD1Q9NX40 245 aa25.42■■□□□ 1.66
CCM2-201ENST00000258781 RIF1Q5UIP0 2472 aaKnown RBP25.41■■□□□ 1.66
CCM2-201ENST00000258781 IRGMA1A4Y4 181 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 TO15178 435 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 TIAF1O95411 115 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 ZGLP1P0C6A0 271 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 ZNF182P17025 639 aaPredicted RBP25.41■■□□□ 1.66
CCM2-201ENST00000258781 LIPAP38571 399 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 SPCS2Q15005 226 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 CCDC157Q569K6 752 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 KIRREL2Q6UWL6 708 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 SLC38A9Q8NBW4 561 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 ARSGQ96EG1 525 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 GAL3ST4Q96RP7 486 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 OR52D1Q9H346 318 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 ATP13A2Q9NQ11 1180 aa25.41■■□□□ 1.66
CCM2-201ENST00000258781 MEPEQ9NQ76 525 aaPredicted RBP25.41■■□□□ 1.66
CCM2-201ENST00000258781 ZFHX2Q9C0A1 2572 aaPredicted RBP25.41■■□□□ 1.66
CCM2-201ENST00000258781 RCBTB2O95199 551 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 UTS2O95399 124 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 CADM2Q8N3J6 435 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 OR52L1Q8NGH7 329 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 PLEKHA8Q96JA3 519 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 WWTR1Q9GZV5 400 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 HHATLQ9HCP6 504 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 EXOSC3Q9NQT5 275 aaKnown RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 TAS2R16Q9NYV7 291 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 KPNA4O00629 521 aaPredicted RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 SCDO00767 359 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 PRKNO60260 465 aaPredicted RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 HPGDP15428 266 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 TBXA2RP21731 343 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 NR4A1P22736 598 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 DCDP81605 110 aaKnown RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 KLHL22Q53GT1 634 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 SLC29A4Q7RTT9 530 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 SLC46A3Q7Z3Q1 461 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 BPHLQ86WA6 291 aaPredicted RBP25.4■■□□□ 1.66
CCM2-201ENST00000258781 ANKK1Q8NFD2 765 aa25.4■■□□□ 1.66
CCM2-201ENST00000258781 DNAJA4Q8WW22 397 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms