RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 CAMLGP49069 296 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 AFF3P51826 1226 aaKnown RBP8.16□□□□□ -1.1
PTCD3-201ENST00000254630 ADARB1P78563 741 aaKnown RBP8.16□□□□□ -1.1
PTCD3-201ENST00000254630 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 TMEM52BQ4KMG9 183 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 IL20RBQ6UXL0 311 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTCD3-201ENST00000254630 CYB561A3Q8NBI2 242 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 ARL5BQ96KC2 179 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 ADOQ96SZ5 270 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 GORASP2Q9H8Y8 452 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 EMCNQ9ULC0 261 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 ANTXRLA6NF34 631 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 J3KTA2 159 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 GFRA2O00451 464 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 OR7A17O14581 309 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 BMP1P13497 986 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 CDK5R2Q13319 367 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 SLC22A10Q63ZE4 541 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 VASNQ6EMK4 673 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 OR5D14Q8NGL3 314 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 LKAAEAR1Q8TD35 194 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 GPR148Q8TDV2 347 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 MRPL38Q96DV4 380 aaKnown RBP8.16□□□□□ -1.1
PTCD3-201ENST00000254630 SLC6A18Q96N87 628 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 NUDT22Q9BRQ3 303 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 UTP23Q9BRU9 249 aaKnown RBP8.16□□□□□ -1.1
PTCD3-201ENST00000254630 SEMA6CQ9H3T2 930 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 TBCCD1Q9NVR7 557 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 PLEK2Q9NYT0 353 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 GPR45Q9Y5Y3 372 aa8.16□□□□□ -1.1
PTCD3-201ENST00000254630 DHRS4L1P0CG22 281 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ARSBP15848 533 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 PKDCCQ504Y2 493 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OPN5Q6U736 354 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OR1S1Q8NH92 325 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 PDLIM5Q96HC4 596 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 HHIPL1Q96JK4 782 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 BCL7BQ9BQE9 202 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SLC6A17Q9H1V8 727 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OBP2BQ9NPH6 170 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 FAM53CQ9NYF3 392 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ASB4Q9Y574 426 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SLX4Q8IY92 1834 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 C17orf113A0A1B0GUU1 675 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 GPR39O43194 453 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ACTL6BO94805 426 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 MPIG6BO95866 241 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 AKAIN1P0CW23 69 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 NCS1P62166 190 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 HOXC5Q00444 222 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SQSTM1Q13501 440 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 HSF5Q4G112 596 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ANKRD13BQ86YJ7 626 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 CMTM1Q8IZ96 169 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 METTL4Q8N3J2 472 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 B3GNT7Q8NFL0 401 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 UBTD2Q8WUN7 234 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ASB17Q8WXJ9 295 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 FOXRED1Q96CU9 486 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SLC39A13Q96H72 371 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 TSPAN10Q9H1Z9 355 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 AK6Q9Y3D8 172 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 CACNG2Q9Y698 323 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 PLSCR5A0PG75 271 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 C2orf72A6NCS6 295 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ZNF705EA8MWA4 302 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 H3BNC9 293 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OR2T1O43869 369 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SNTB2Q13425 540 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 PDE7AQ13946 482 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SLC16A9Q7RTY1 509 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 KIAA0907Q7Z7F0 614 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 TXNDC15Q96J42 360 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OR5B12Q96R08 314 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 NXF5Q9H1B4 397 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 DDX31Q9H8H2 851 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 DYNLRB1Q9NP97 96 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 INPP5EQ9NRR6 644 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 MYH9P35579 1960 aaKnown RBP8.15□□□□□ -1.1
PTCD3-201ENST00000254630 RFXAPO00287 272 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SIGLEC6O43699 453 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 KNG1P01042 644 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 F11P03951 625 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 FAM57BQ71RH2 274 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 COMTD1Q86VU5 262 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 SORCS2Q96PQ0 1159 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 OR2B2Q9GZK3 357 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 THSD1Q9NS62 852 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 WIF1Q9Y5W5 379 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 NUBP2Q9Y5Y2 271 aa8.15□□□□□ -1.1
PTCD3-201ENST00000254630 F5H5P2 479 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 STT3AP46977 705 aa8.15□□□□□ -1.11
PTCD3-201ENST00000254630 RRADP55042 308 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms