RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CHMP24386 653 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 HLA-DMAP28067 261 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 C18orf63Q68DL7 685 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 PLAG1Q6DJT9 500 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 DCUN1D4Q92564 292 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 OR6C1Q96RD1 312 aa17.5■□□□□ 0.39
SMARCC1-201ENST00000254480 LYRM1O43325 122 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 UGT2B7P16662 529 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SLC6A8P48029 635 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 GAB1Q13480 694 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 GAREM2Q75VX8 874 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 S100PBPQ96BU1 408 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 CHFRQ96EP1 664 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 OR14J1Q9UGF5 321 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 MCTS1Q9ULC4 181 aaKnown RBP17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 DVL2O14641 736 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 MRPL2Q5T653 305 aaKnown RBP17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 BAIAP2L2Q6UXY1 529 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 KCTD20Q7Z5Y7 419 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 GPR148Q8TDV2 347 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TM9SF4Q92544 642 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 CD93Q9NPY3 652 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 PCDHGA1Q9Y5H4 931 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 RGPD5Q99666 1765 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 H7C2Y5 167 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TM4SF4P48230 202 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 ABRACLQ9P1F3 81 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TRIM64CA6NLI5 447 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SCRG1O75711 98 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 RAB3DO95716 219 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 ARSBP15848 533 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 OR2G6Q5TZ20 316 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 KIAA1211LQ6NV74 962 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 TBPL2Q6SJ96 375 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SLC35D2Q76EJ3 337 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SYT11Q9BT88 431 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SMIM3Q9BZL3 60 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 CLMPQ9H6B4 373 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 MEPEQ9NQ76 525 aaPredicted RBP17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 PRSS16Q9NQE7 514 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 LOC105369274A0A096LPK9 316 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 MT-ND4P03905 459 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 IL32P24001 234 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 VASPP50552 380 aaPredicted RBP17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 SERPINA11Q86U17 422 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 OR4N4Q8N0Y3 316 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 CHCHD4Q8N4Q1 142 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 ACBD4Q8NC06 268 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 HSD17B8Q92506 261 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 ACKR4Q9NPB9 350 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 OR6C2Q9NZP2 312 aa17.49■□□□□ 0.39
SMARCC1-201ENST00000254480 A0A0G2JMP0 313 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 TRBV4-1A0A0J9YWV2 114 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 SHOXO15266 292 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 SLC22A5O76082 557 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 OR4M2Q8NGB6 313 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 TBC1D20Q96BZ9 403 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ADH6P28332 368 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ACTBP60709 375 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ACTG1P63261 375 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 OR2T11Q8NH01 316 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 CHPT1Q8WUD6 406 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 TRMT2BQ96GJ1 504 aaKnown RBP17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ANKRD60Q9BZ19 345 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ENKD1Q9H0I2 346 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ANKRD30BLA7E2S9 258 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ARPC1BO15143 372 aaKnown RBP17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 BEST4Q8NFU0 473 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 OR5K2Q8NHB8 316 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 TRUB1Q8WWH5 349 aaKnown RBP17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 SSX3Q99909 188 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 KLKB1P03952 638 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ACPPP15309 386 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF44P15621 663 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 GABRA2P47869 451 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 FGFBP1Q14512 234 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 MOB3CQ70IA8 216 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 FAM57BQ71RH2 274 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 GPR155Q7Z3F1 870 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 DUSP19Q8WTR2 217 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 HLA-CQ95604 372 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 PRR14Q9BWN1 585 aa17.48■□□□□ 0.39
SMARCC1-201ENST00000254480 ARHGEF15O94989 841 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 ADRA1AP35348 466 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 IDUAP35475 653 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 VEZF1Q14119 521 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 TMEM176BQ3YBM2 270 aaPredicted RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 LINC00696Q6ZRV3 163 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 OR2T35Q8NGX2 323 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 AQP9O43315 295 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 ZNF322Q6U7Q0 402 aaPredicted RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 B3GNT8Q7Z7M8 397 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 C7orf50Q9BRJ6 194 aaKnown RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 OBP2BQ9NPH6 170 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 OR7A17O14581 309 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 CRHBPP24387 322 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms