RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 FAM205BPQ63HN1 556 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 ZNF619Q8N2I2 560 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 POGLUT1Q8NBL1 392 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 SMPDL3BQ92485 455 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 RBM18Q96H35 190 aaKnown RBP17.13■□□□□ 0.33
LRP3-201ENST00000253193 TNFRSF13CQ96RJ3 184 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 HRASLS2Q9NWW9 162 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 SF3B6Q9Y3B4 125 aaKnown RBP17.13■□□□□ 0.33
LRP3-201ENST00000253193 NDUFS1P28331 727 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 PITPNBP48739 271 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 E2F1Q01094 437 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 RUNX2Q13950 521 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 AMZ1Q400G9 498 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 MRM1Q6IN84 353 aaKnown RBP17.13■□□□□ 0.33
LRP3-201ENST00000253193 ZNF655Q8N720 491 aaPredicted RBP17.13■□□□□ 0.33
LRP3-201ENST00000253193 BEST4Q8NFU0 473 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 PATE1Q8WXA2 126 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 SLC28A3Q9HAS3 691 aa17.13■□□□□ 0.33
LRP3-201ENST00000253193 ZNF780AO75290 641 aaPredicted RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 CENPAP49450 140 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 ILF3Q12906 894 aaKnown RBP eCLIP17.12■□□□□ 0.33
LRP3-201ENST00000253193 RNLSQ5VYX0 342 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 ELMOD2Q8IZ81 293 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 ARL14Q8N4G2 192 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 OR1E3Q8WZA6 343 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 GSDMCQ9BYG8 508 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 SPTBP11277 2137 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 A0A0B4J203 849 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 E9PI62 339 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 HK1P19367 917 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 DRD5P21918 477 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 PEBP1P30086 187 aaKnown RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 SLC25A30Q5SVS4 291 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 VN1R4Q7Z5H5 301 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 KIAA1143Q96AT1 154 aaPredicted RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 UPRTQ96BW1 309 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 RSPH9Q9H1X1 276 aaPredicted RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 GTF2A1LQ9UNN4 478 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 AK6Q9Y3D8 172 aaKnown RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 RPP14O95059 124 aaKnown RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 ALG10BQ5I7T1 473 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 PRSS41Q7RTY9 318 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 GATSQ8NAP1 163 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 PCNPQ8WW12 178 aaKnown RBP17.12■□□□□ 0.33
LRP3-201ENST00000253193 SERINC2Q96SA4 455 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 TEAD3Q99594 435 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 MED17Q9NVC6 651 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 CES1P1Q9UKY3 287 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 POLHQ9Y253 713 aa17.12■□□□□ 0.33
LRP3-201ENST00000253193 SGK494L7N484 410 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 EDNRAP25101 427 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 GXYLT1Q4G148 440 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 LINGO2Q7L985 606 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ACOT12Q8WYK0 555 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 GHSRQ92847 366 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 RNF32Q9H0A6 362 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 DOCK9Q9BZ29 2069 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 GXYLT2A0PJZ3 443 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 TOXO94900 526 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 CRYZL1O95825 349 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SNRPBP14678 240 aaKnown RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 RAB3BP20337 219 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 VASPP50552 380 aaPredicted RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 PPP2CBP62714 309 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 PPP2CAP67775 309 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 PRAMEF8Q5VWM4 474 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 PRAMEF7Q5VXH5 474 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 NIPAL3Q6P499 406 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SFXN4Q6P4A7 337 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 POMZP3Q6PJE2 187 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ESPNLQ6ZVH7 1005 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 GPR135Q8IZ08 494 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 UXS1Q8NBZ7 420 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ABHD4Q8TB40 342 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 DNAJA4Q8WW22 397 aaPredicted RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 SYNPO2LQ9H987 977 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ASB6Q9NWX5 421 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SIRT4Q9Y6E7 314 aaPredicted RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 CDHR4A6H8M9 788 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 KLF8O95600 359 aaPredicted RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 EVI2BP34910 448 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 GPR176Q14439 515 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 THSD4Q6ZMP0 1018 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SLC38A6Q8IZM9 456 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 FRMD1Q8N878 549 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ZNF681Q96N22 645 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 DPAGT1Q9H3H5 408 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ANKRD19PQ9H560 264 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 ISYNA1Q9NPH2 558 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 WSB2Q9NYS7 404 aaPredicted RBP17.11■□□□□ 0.33
LRP3-201ENST00000253193 COQ3Q9NZJ6 369 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 DAPP1Q9UN19 280 aa17.11■□□□□ 0.33
LRP3-201ENST00000253193 SLC9B1P1A6NJY1 282 aa17.1■□□□□ 0.33
LRP3-201ENST00000253193 EIF4EP06730 217 aaKnown RBP17.1■□□□□ 0.33
LRP3-201ENST00000253193 PSMB10P40306 273 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms