RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IQCGQ9H095 443 aaKnown RBP9.17□□□□□ -0.94
VPS50-201ENST00000251739 PIGUQ9H490 435 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 FANCFQ9NPI8 374 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 ZCCHC3Q9NUD5 404 aaKnown RBP9.17□□□□□ -0.94
VPS50-201ENST00000251739 GPATCH2Q9NW75 528 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 SH3BP4Q9P0V3 963 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 ADAM21Q9UKJ8 722 aa9.17□□□□□ -0.94
VPS50-201ENST00000251739 PIP5K1BO14986 540 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 TRIM13O60858 407 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 DNAJA2O60884 412 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 CHRNGP07510 517 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 PABPC4LP0CB38 370 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 LAMP1P11279 417 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 PRKCAP17252 672 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 ARRB2P32121 409 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 SFTPDP35247 375 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 CARD18P57730 90 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 PTGR1Q14914 329 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 TAB1Q15750 504 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 TOMM34Q15785 309 aaPredicted RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 GALNTL6Q49A17 601 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 NCMAPQ5T1S8 102 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 PDSS1Q5T2R2 415 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 PPP4R4Q6NUP7 873 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 CDC73Q6P1J9 531 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 LRIG3Q6UXM1 1119 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 DNAJC14Q6Y2X3 702 aaPredicted RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 DNM1P46Q6ZS02 220 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 NUFIP2Q7Z417 695 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 SZRD1Q7Z422 152 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 R3HCC1LQ7Z5L2 792 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 C4orf33Q8N1A6 199 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 OR7A2PQ8NGA2 310 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 GPR119Q8TDV5 335 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 EPS8L3Q8TE67 593 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 TWIST2Q8WVJ9 160 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 ROBO4Q8WZ75 1007 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 AKAP1Q92667 903 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS50-201ENST00000251739 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 C12orf49Q9H741 205 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 CXorf36Q9H7Y0 433 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 GIMAP2Q9UG22 337 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 MID2Q9UJV3 735 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 RNF115Q9Y4L5 304 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 KCNE3Q9Y6H6 103 aa9.16□□□□□ -0.94
VPS50-201ENST00000251739 HEATR1Q9H583 2144 aaKnown RBP9.16□□□□□ -0.94
VPS50-201ENST00000251739 ARFGEF3Q5TH69 2177 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 NPIPA5A0A0B4J1W7 369 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 NPIPA7E9PJI5 369 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ZNF195O14628 629 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 NPHS1O60500 1241 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 CHEK2O96017 543 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 SOD3P08294 240 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 NPIPA8P0DM63 369 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 HPGDP15428 266 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 HPCAL1P37235 193 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 P2RX1P51575 399 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ATP5J2P56134 94 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 C21orf58P58505 322 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 RPS4XP62701 263 aaKnown RBP9.15□□□□□ -0.94
VPS50-201ENST00000251739 TNK1Q13470 666 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 P2RY6Q15077 328 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ETFDHQ16134 617 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ARL13AQ5H913 290 aaPredicted RBP9.15□□□□□ -0.94
VPS50-201ENST00000251739 DCST2Q5T1A1 773 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 SFRP5Q5T4F7 317 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 GTF2IRD2BQ6EKJ0 949 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 FCRLAQ7L513 359 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
VPS50-201ENST00000251739 GTF2IRD2Q86UP8 949 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 TUSC5Q8IXB3 177 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 RIMKLAQ8IXN7 391 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 BANPQ8N9N5 519 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 CCDC63Q8NA47 563 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 OR56A1Q8NGH5 318 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 FBXO27Q8NI29 283 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 KIF18AQ8NI77 898 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 PHOSPHO1Q8TCT1 267 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 SFXN5Q8TD22 340 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ZFP90Q8TF47 636 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 OR5P2Q8WZ92 322 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 JADE3Q92613 823 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 COQ8BQ96D53 544 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 APOPT1Q96IL0 206 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 MRGPRX4Q96LA9 322 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 HDHD5Q9BXW7 423 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 ACTRT3Q9BYD9 372 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 SERHL2Q9H4I8 314 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 FIS1Q9Y3D6 152 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 TRAF6Q9Y4K3 522 aa9.15□□□□□ -0.94
VPS50-201ENST00000251739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.14□□□□□ -0.958e-11■■■■□ 22.1
VPS50-201ENST00000251739 ANK2Q01484 3957 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 UQCRHLA0A096LP55 91 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 GOLGA8QA0A0J9YX86 632 aa9.14□□□□□ -0.95
VPS50-201ENST00000251739 GOLGA8OA6NCC3 632 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms