RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SRXN1Q9BYN0 137 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 CXorf56Q9H5V9 222 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 PRR14LQ5THK1 2151 aa18.76■□□□□ 0.59
NEDD8-201ENST00000250495 ABCA2Q9BZC7 2435 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 AK1P00568 194 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 PAX1P15863 534 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 MATN1P21941 496 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 SOAT1P35610 550 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 RNF144AP50876 292 aaPredicted RBP18.75■□□□□ 0.59
NEDD8-201ENST00000250495 RAC3P60763 192 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 SELENBP1Q13228 472 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 CBFBQ13951 182 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 SMU1Q2TAY7 513 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 PGS1Q32NB8 556 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 SLC25A53Q5H9E4 307 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 NUFIP2Q7Z417 695 aaKnown RBP18.75■□□□□ 0.59
NEDD8-201ENST00000250495 C6orf120Q7Z4R8 191 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 GABRG1Q8N1C3 465 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 CIARTQ8N365 385 aaPredicted RBP18.75■□□□□ 0.59
NEDD8-201ENST00000250495 ZNF611Q8N823 705 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 OR5AK3PQ8NH89 298 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 RFWD2Q8NHY2 731 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 IGFBPL1Q8WX77 278 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 S100PBPQ96BU1 408 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 USB1Q9BQ65 265 aaKnown RBP18.75■□□□□ 0.59
NEDD8-201ENST00000250495 TMEM204Q9BSN7 226 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 NMUR2Q9GZQ4 415 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 NGBQ9NPG2 151 aa18.75■□□□□ 0.59
NEDD8-201ENST00000250495 NOP53Q9NZM5 478 aaKnown RBP18.75■□□□□ 0.59
NEDD8-201ENST00000250495 FREM1Q5H8C1 2179 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 HS3ST1O14792 307 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 TYROBPO43914 113 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 STX11O75558 287 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 GCM2O75603 506 aaPredicted RBP18.74■□□□□ 0.59
NEDD8-201ENST00000250495 SASH3O75995 380 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 NTN1O95631 604 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 PLAUP00749 431 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 UBL4AP11441 157 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 CREB1P16220 341 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 IL32P24001 234 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 SLC7A1P30825 629 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 EMBQ6PCB8 327 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 TFAP2EQ6VUC0 442 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 TMCO5AQ8N6Q1 288 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 OR5D16Q8NGK9 328 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 AENQ8WTP8 325 aaKnown RBP18.74■□□□□ 0.59
NEDD8-201ENST00000250495 HSD17B8Q92506 261 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 COQ10BQ9H8M1 238 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 ASIC5Q9NY37 505 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 PCDHGB4Q9UN71 923 aa18.74■□□□□ 0.59
NEDD8-201ENST00000250495 USF3Q68DE3 2245 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 SERINC4A6NH21 518 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 SMAD7O15105 426 aaKnown RBP18.73■□□□□ 0.59
NEDD8-201ENST00000250495 ETV4P43268 484 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 CCR4P51679 360 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 P2RY6Q15077 328 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 QPRTQ15274 297 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 GPR68Q15743 365 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 NDUFAF6Q330K2 333 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 PDZK1Q5T2W1 519 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 ALKBH2Q6NS38 261 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 AKAP1Q92667 903 aaKnown RBP eCLIP18.73■□□□□ 0.592e-7■■□□□ 11.6
NEDD8-201ENST00000250495 LAT2Q9GZY6 243 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 ZNF701Q9NV72 531 aaPredicted RBP18.73■□□□□ 0.59
NEDD8-201ENST00000250495 EXD2Q9NVH0 621 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 KLHL9Q9P2J3 617 aa18.73■□□□□ 0.59
NEDD8-201ENST00000250495 TRIM64A6NGJ6 449 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 TRIM64BA6NI03 449 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ETV2O00321 342 aaPredicted RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 RNASET2O00584 256 aaKnown RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 CNOT4O95628 575 aaKnown RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ADAP00813 363 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ENPP1P22413 925 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ZNF141Q15928 474 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ARHGAP11BQ3KRB8 267 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 TIGD2Q4W5G0 525 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 OR4F3Q6IEY1 312 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ADAM5Q6NVV9 412 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 TMEM234Q8WY98 164 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 KISS1RQ969F8 398 aaPredicted RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 SLC35G5Q96KT7 338 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 THUMPD3Q9BV44 507 aaKnown RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 TMEM109Q9BVC6 243 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 ESRP2Q9H6T0 727 aaKnown RBP18.72■□□□□ 0.59
NEDD8-201ENST00000250495 BCO1Q9HAY6 547 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 SERINC1Q9NRX5 453 aa18.72■□□□□ 0.59
NEDD8-201ENST00000250495 RNF103-CHMP3A0A140T963 221 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 A0A1W2PNR3 127 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 FCMRO60667 390 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 CYP7B1O75881 506 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 AGR2O95994 175 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 RPS26P62854 115 aaKnown RBP18.71■□□□□ 0.59
NEDD8-201ENST00000250495 ZNF844Q08AG5 666 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 ITGADQ13349 1161 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 CASP8Q14790 479 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 C3orf33Q6P1S2 294 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 C16orf62Q7Z3J2 963 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 CLECL1Q8IZS7 167 aa18.71■□□□□ 0.59
NEDD8-201ENST00000250495 VPS37AQ8NEZ2 397 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms