RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 GPR18Q14330 331 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 HBMQ6B0K9 141 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF782Q6ZMW2 699 aaPredicted RBP15.75■□□□□ 0.11
FOXA1-201ENST00000250448 LRRC28Q86X40 367 aaPredicted RBP15.75■□□□□ 0.11
FOXA1-201ENST00000250448 PHF21AQ96BD5 680 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 C17orf62Q9BQA9 187 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 MED28Q9H204 178 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 MRPS30Q9NP92 439 aaKnown RBP15.75■□□□□ 0.11
FOXA1-201ENST00000250448 CYSLTR2Q9NS75 346 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 TNFRSF10DQ9UBN6 386 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 GLOD5A6NK44 160 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 LEUTXA8MZ59 168 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 SOCS6O14544 535 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 RFPL3O75679 317 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 CTSEP14091 401 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 GPR4P46093 362 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 BCL2L15Q5TBC7 163 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 SMARCD3Q6STE5 483 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 TMEM107Q6UX40 140 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF793Q6ZN11 406 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 VRK2Q86Y07 508 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 SIRT6Q8N6T7 355 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 OR8H1Q8NGG4 311 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 C16orf58Q96GQ5 468 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 FAIM2Q9BWQ8 316 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 JAM3Q9BX67 310 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 KCNN2Q9H2S1 579 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 CHRDQ9H2X0 955 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 KIR3DX1Q9H7L2 352 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 ENAMQ9NRM1 1142 aa15.75■□□□□ 0.11
FOXA1-201ENST00000250448 MDC1Q14676 2089 aaKnown RBP15.75■□□□□ 0.11
FOXA1-201ENST00000250448 CDK2AP1O14519 115 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 ERAL1O75616 437 aaKnown RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 SLC2A10O95528 541 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 TALDO1P37837 337 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 PRAMEF8Q5VWM4 474 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 PRAMEF7Q5VXH5 474 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 BHLHB9Q6PI77 547 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 IL20RBQ6UXL0 311 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 DGLUCYQ7Z3D6 616 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 SPEM1Q8N4L4 309 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 OR2L3Q8NG85 312 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 THAP7Q9BT49 309 aaPredicted RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 PCBD2Q9H0N5 130 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 SRMSQ9H3Y6 488 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 ANKRD19PQ9H560 264 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 CSNK1G3Q9Y6M4 447 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 EIF4EP06730 217 aaKnown RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 TFPIP10646 304 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 TRHRP34981 398 aaPredicted RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 BDH1Q02338 343 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF620Q6ZNG0 422 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 NKAIN4Q8IVV8 208 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 GPR137Q96N19 417 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 DHRS9Q9BPW9 319 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 PITHD1Q9GZP4 211 aaPredicted RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 AICDAQ9GZX7 198 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 ABCG5Q9H222 651 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 ISG20L2Q9H9L3 353 aaKnown RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 HINT3Q9NQE9 182 aaKnown RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 MRPL39Q9NYK5 338 aaKnown RBP15.74■□□□□ 0.11
FOXA1-201ENST00000250448 IL20Q9NYY1 176 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 NCOR1O75376 2440 aa15.74■□□□□ 0.11
FOXA1-201ENST00000250448 METTL12A8MUP2 240 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 HRO43593 1189 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 POLR2CP19387 275 aaPredicted RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 RBMS1P29558 406 aaKnown RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 STK11Q15831 433 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 ZBTB37Q5TC79 503 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 LRRC17Q8N6Y2 441 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 DTX3Q8N9I9 347 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 OR56A1Q8NGH5 318 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 ACOT11Q8WXI4 607 aaPredicted RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 NECAB3Q96P71 396 aaPredicted RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 SLC38A1Q9H2H9 487 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 H2AFY2Q9P0M6 372 aaPredicted RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 APOBEC3BQ9UH17 382 aaKnown RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 ING4Q9UNL4 249 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 CABIN1Q9Y6J0 2220 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 B4DGG1 531 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 PRICKLE3O43900 615 aaPredicted RBP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 PIP5K1CO60331 668 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 BTCP35070 178 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 BCL6P41182 706 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 DUSP2Q05923 314 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 ZNF750Q32MQ0 723 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 PLEKHM3Q6ZWE6 761 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 OR51G2Q8NGK0 314 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 GPBAR1Q8TDU6 330 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 SLC37A2Q8TED4 501 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.73■□□□□ 0.11
FOXA1-201ENST00000250448 IL20RAQ9UHF4 553 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 PCOLCE2Q9UKZ9 415 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 NTNG1Q9Y2I2 539 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 HEBP2Q9Y5Z4 205 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 CACNG2Q9Y698 323 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 C7orf66A4D0T2 115 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 CLEC3AO75596 197 aa15.73■□□□□ 0.11
FOXA1-201ENST00000250448 DHFRP00374 187 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms