RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 A0A1B0GWA3 101 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 CCDC182A6NF36 153 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 GTPBP1O00178 669 aaKnown RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PTP4A3O75365 173 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 NGFRP08138 427 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 ACAA2P42765 397 aaKnown RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 RPL13AP3Q6NVV1 102 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF544Q6NX49 715 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 CNIH2Q6PI25 160 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 RAB43Q86YS6 212 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 AVL9Q8NBF6 648 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR6F1Q8NGZ6 308 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PMM1Q92871 262 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 KIAA1143Q96AT1 154 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 EFHD2Q96C19 240 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 TEAD3Q99594 435 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 SOSTQ9BQB4 213 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR51V1Q9H2C8 321 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 SEMA6CQ9H3T2 930 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 MARCH7Q9H992 704 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 TRPV5Q9NQA5 729 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 MALT1Q9UDY8 824 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 FBXL4Q9UKA2 621 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 POMT2Q9UKY4 750 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 NDRG2Q9UN36 371 aaKnown RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMEM5Q9Y2B1 443 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 DTX4Q9Y2E6 619 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 RBMX2Q9Y388 322 aaKnown RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 FAM86C2PA6NEL3 165 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PRR23D1E9PI22 279 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 TFECO14948 347 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PLA2G10O15496 165 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 CHP2O43745 196 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 THEGLP0DJG4 465 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PRR23D2P0DMB1 279 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 BDH1Q02338 343 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 P2RY14Q15391 338 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 RSBN1Q5VWQ0 802 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 NR2C2APQ86WQ0 139 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR10H4Q8NGA5 316 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 PPP1R3EQ9H7J1 279 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 FOLH1BQ9HBA9 442 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 C14orf105Q9NVL8 296 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 DNAJB12Q9NXW2 375 aaKnown RBP18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 CYP8B1Q9UNU6 501 aa18.04■□□□□ 0.48
CDC42EP1-201ENST00000249014 A0A0A6YYC8 382 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 DAPL1A0PJW8 107 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 I3L1I5 382 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 HRO43593 1189 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 CDC123O75794 336 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 MRPL3P09001 348 aaKnown RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC16A1P53985 500 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 RPS7P62081 194 aaKnown RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 FHL1Q13642 323 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 FAM53BQ14153 422 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 GALEQ14376 348 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 GATAD2AQ86YP4 633 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 CYB561A3Q8NBI2 242 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 SMAP2Q8WU79 429 aaPredicted RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 TOE1Q96GM8 510 aaKnown RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 LMF2Q9BU23 707 aaKnown RBP18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZNF426Q9BUY5 554 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC22A4Q9H015 551 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 HCN3Q9P1Z3 774 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 E9PI62 339 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 COQ9O75208 318 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 PPP1R3DO95685 299 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 CTSEP14091 401 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 KIAA0895LQ68EN5 471 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 TNFRSF13CQ96RJ3 184 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 FBXL21Q9UKT6 434 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC35A3Q9Y2D2 325 aa18.03■□□□□ 0.48
CDC42EP1-201ENST00000249014 MEIOCA2RUB1 952 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 OR2W5A6NFC9 320 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 AGRPO00253 132 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 HCN1O60741 890 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 RGS9O75916 674 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 GALP22466 123 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC2A5P22732 501 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 EVX1P49640 407 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 CRMP1Q14194 572 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 Q6ZS52 159 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 GRAMD2AQ8IUY3 354 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 SLC44A3Q8N4M1 653 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 C19orf47Q8N9M1 422 aaKnown RBP18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 ZDHHC1Q8WTX9 485 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 PPIL3Q9H2H8 161 aaKnown RBP18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 GPR27Q9NS67 375 aa18.02■□□□□ 0.48
CDC42EP1-201ENST00000249014 TMEM131Q92545 1883 aa18.02■□□□□ 0.47
CDC42EP1-201ENST00000249014 GON4LQ3T8J9 2241 aa18.02■□□□□ 0.47
CDC42EP1-201ENST00000249014 SLC22A31A6NKX4 558 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 B4DGG1 531 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 HYAL3O43820 417 aaPredicted RBP18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 ARMC6Q6NXE6 501 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 OAFQ86UD1 273 aa18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 MCATQ8IVS2 390 aaKnown RBP18.01■□□□□ 0.47
CDC42EP1-201ENST00000249014 SMRP1Q8NCR6 262 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms