RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 APOOLQ6UXV4 268 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 WDR88Q6ZMY6 472 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
SDF2-201ENST00000247020 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 MRGPREQ86SM8 312 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 TEX47Q8TBZ9 253 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 OSTF1Q92882 214 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 C8orf44Q96CB5 159 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 GPA33Q99795 319 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 COL25A1Q9BXS0 654 aaPredicted RBP13.01□□□□□ -0.33
SDF2-201ENST00000247020 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 MYOTQ9UBF9 498 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 PCNX2A6NKB5 2137 aa13.01□□□□□ -0.33
SDF2-201ENST00000247020 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
SDF2-201ENST00000247020 A0A087WUJ7 227 aa13□□□□□ -0.33
SDF2-201ENST00000247020 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
SDF2-201ENST00000247020 C21orf140B9A014 251 aa13□□□□□ -0.33
SDF2-201ENST00000247020 NDUFB5O43674 189 aa13□□□□□ -0.33
SDF2-201ENST00000247020 SOX14O95416 240 aa13□□□□□ -0.33
SDF2-201ENST00000247020 PNMTP11086 282 aa13□□□□□ -0.33
SDF2-201ENST00000247020 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
SDF2-201ENST00000247020 POU1F1P28069 291 aa13□□□□□ -0.33
SDF2-201ENST00000247020 TTKP33981 857 aa13□□□□□ -0.33
SDF2-201ENST00000247020 GIPRP48546 466 aa13□□□□□ -0.33
SDF2-201ENST00000247020 RNF144AP50876 292 aaPredicted RBP13□□□□□ -0.33
SDF2-201ENST00000247020 SSPNQ14714 243 aa13□□□□□ -0.33
SDF2-201ENST00000247020 TMEM201Q5SNT2 666 aa13□□□□□ -0.33
SDF2-201ENST00000247020 SLC25A30Q5SVS4 291 aa13□□□□□ -0.33
SDF2-201ENST00000247020 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
SDF2-201ENST00000247020 KIRREL2Q6UWL6 708 aa13□□□□□ -0.33
SDF2-201ENST00000247020 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
SDF2-201ENST00000247020 NDUFAF7Q7L592 441 aa13□□□□□ -0.33
SDF2-201ENST00000247020 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
SDF2-201ENST00000247020 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
SDF2-201ENST00000247020 GRHL3Q8TE85 626 aa13□□□□□ -0.33
SDF2-201ENST00000247020 CT55Q8WUE5 264 aa13□□□□□ -0.33
SDF2-201ENST00000247020 APH1BQ8WW43 257 aa13□□□□□ -0.33
SDF2-201ENST00000247020 C3orf49Q96BT1 292 aa13□□□□□ -0.33
SDF2-201ENST00000247020 Q96MT0 163 aa13□□□□□ -0.33
SDF2-201ENST00000247020 GPR87Q9BY21 358 aa13□□□□□ -0.33
SDF2-201ENST00000247020 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
SDF2-201ENST00000247020 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
SDF2-201ENST00000247020 CNIH4Q9P003 139 aa13□□□□□ -0.33
SDF2-201ENST00000247020 TCFL5Q9UL49 500 aa13□□□□□ -0.33
SDF2-201ENST00000247020 ICAM5Q9UMF0 924 aa13□□□□□ -0.33
SDF2-201ENST00000247020 CDH10Q9Y6N8 788 aa13□□□□□ -0.33
SDF2-201ENST00000247020 SDK2Q58EX2 2172 aa13□□□□□ -0.33
SDF2-201ENST00000247020 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
SDF2-201ENST00000247020 SOCS6O14544 535 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 PIP5K1CO60331 668 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 IFI30P13284 250 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 ICAM2P13598 275 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 TCN2P20062 427 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 PGCP20142 388 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 P2RX1P51575 399 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 RPS15P62841 145 aaKnown RBP12.99□□□□□ -0.33
SDF2-201ENST00000247020 SLC35A2P78381 396 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
SDF2-201ENST00000247020 BTBD16Q32M84 506 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 BORAQ6PGQ7 559 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 PTCHD4Q6ZW05 846 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
SDF2-201ENST00000247020 KIF18BQ86Y91 864 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 CADM2Q8N3J6 435 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 BPIFB6Q8NFQ5 453 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 BRIX1Q8TDN6 353 aaKnown RBP12.99□□□□□ -0.33
SDF2-201ENST00000247020 HGDQ93099 445 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 MESP1Q9BRJ9 268 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 TMEM43Q9BTV4 400 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 FARSAQ9Y285 508 aaKnown RBP12.99□□□□□ -0.33
SDF2-201ENST00000247020 CARD8Q9Y2G2 431 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 PCDHGB6Q9Y5F9 930 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 PCDHGB1Q9Y5G3 927 aa12.99□□□□□ -0.33
SDF2-201ENST00000247020 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 A0A1W2PNU3 283 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CDC40O60508 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
SDF2-201ENST00000247020 FAM20BO75063 409 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 RCBTB2O95199 551 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 FBXO45P0C2W1 286 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 JUNBP17275 347 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 CSRP1P21291 193 aaKnown RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 CD82P27701 267 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 FMO3P31513 532 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 SLC1A3P43003 542 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 SLC9A3P48764 834 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CDH15P55291 814 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
SDF2-201ENST00000247020 ZNF117Q03924 483 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 CBFBQ13951 182 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 GINS1Q14691 196 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
SDF2-201ENST00000247020 NADK2Q4G0N4 442 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms