RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HOXB5P09067 269 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 F3P13726 295 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 P2RY14Q15391 338 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 FAM57BQ71RH2 274 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 METTL4Q8N3J2 472 aa12.45□□□□□ -0.42
NEK9-201ENST00000238616 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
NEK9-201ENST00000238616 OR2T1O43869 369 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 FOXD2O60548 495 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 EPHA5P54756 1037 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 DIO3P55073 304 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 C18orf21Q32NC0 220 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HRH4Q9H3N8 390 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HCFC1R1Q9NWW0 138 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 RNF186Q9NXI6 227 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 BOKQ9UMX3 212 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 VASPP50552 380 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 EDDM3BP56851 147 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SLC14A1Q13336 389 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 FAM185AQ8N0U4 392 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 FNDC9Q8TBE3 224 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 ARL11Q969Q4 196 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 REEP6Q96HR9 211 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HOXD1Q9GZZ0 328 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 CRABP1P29762 137 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 PKLRP30613 574 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 CDKN2DP55273 166 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 OSTM1Q86WC4 334 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TCEAL8Q8IYN2 117 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 CMTM2Q8TAZ6 248 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 ZNF419Q96HQ0 510 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 NECTIN4Q96NY8 510 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 ZFYVE21Q9BQ24 234 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 IL23AQ9NPF7 189 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SOCS6O14544 535 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HRH2P25021 359 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 NFYBP25208 207 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 RAB11AP62491 216 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HIST2H3PS2Q5TEC6 136 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 PRAMEF20Q5VT98 475 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TLDC1Q6P9B6 456 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SEZ6LQ9BYH1 1024 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 KCNJ16Q9NPI9 418 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TM7SF3Q9NS93 570 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 PHRF1Q9P1Y6 1649 aaKnown RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TSTD3H0UI37 97 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 RDH16O75452 317 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TK1P04183 234 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HLA-DMAP28067 261 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HTR5AP47898 357 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TP53I3Q53FA7 332 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SNAPC3Q92966 411 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 INTS12Q96CB8 462 aaKnown RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SPIN2AQ99865 258 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 SPIN2BQ9BPZ2 258 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 MST1RQ04912 1400 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 HTRA2O43464 458 aaPredicted RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 PRSS3P35030 304 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 CYCSP99999 105 aaKnown RBP12.44□□□□□ -0.42
NEK9-201ENST00000238616 MSS51Q4VC12 460 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
NEK9-201ENST00000238616 TCAPO15273 167 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 TGM4P49221 684 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 ZNF791Q3KP31 576 aaPredicted RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 SPTBN1Q01082 2364 aaKnown RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 EFSO43281 561 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 GRPP07492 148 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 FCER1GP30273 86 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 FAM122CQ6P4D5 195 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 MFSD6LQ8IWD5 586 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 ZNF382Q96SR6 550 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 FZD8Q9H461 694 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 SACM1LQ9NTJ5 587 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 ARSAP15289 507 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 SPINT3P49223 89 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 BAXQ07812 192 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 IKZF1Q13422 519 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 BATF2Q8N1L9 274 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 FN3KRPQ9HA64 309 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 SLC6A5Q9Y345 797 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 A6NIN4 97 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 FAM159BA6NKW6 160 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 MRPL33O75394 65 aaKnown RBP12.43□□□□□ -0.42
NEK9-201ENST00000238616 RPA2P15927 270 aa12.43□□□□□ -0.42
NEK9-201ENST00000238616 CASP7P55210 303 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms