RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TSPAN2O60636 221 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 KRT33AO76009 404 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 ITGB2P05107 769 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR2B6P58173 313 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 MDGA2Q7Z553 956 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 HIPK1Q86Z02 1210 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 CLIP4Q8N3C7 705 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 LINC00471Q8N535 108 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 ADAMTS16Q8TE57 1224 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 GATA6Q92908 595 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 ALPK1Q96QP1 1244 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 B3GNT3Q9Y2A9 372 aa10.18□□□□□ -0.78
TNFAIP3-201ENST00000237289 G3V2T6 193 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 LGI1O95970 557 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PTNP21246 168 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 SUMO3P55854 103 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 ENTPD8Q5MY95 495 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PGM2L1Q6PCE3 622 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 MPP4Q96JB8 637 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR5B2Q96R09 309 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PRRG3Q9BZD7 231 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PCDHGA9Q9Y5G4 932 aaKnown RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CDK2AP1O14519 115 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 TACR3P29371 465 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 POLR2HP52434 150 aaKnown RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 DSCR4P56555 118 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 Q0VFX4 171 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZAR1Q86SH2 424 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 DNAJA3Q96EY1 480 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CENPNQ96H22 339 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 SLC7A7Q9UM01 511 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CAMK2AQ9UQM7 478 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 TP53TG5Q9Y2B4 290 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 A0A1W2PQD3 144 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 IFI30P13284 250 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 LRTOMTQ8WZ04 291 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PRRC1Q96M27 445 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF300Q96RE9 604 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CCM2LQ9NUG4 571 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 H2AFY2Q9P0M6 372 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 STX18Q9P2W9 335 aaKnown RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF223Q9UK11 482 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 A0A087WZY1 265 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 IGKV1D-16P01601 117 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 OPN1LWP04000 364 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 WT1P19544 449 aaPredicted RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 DNAJA1P31689 397 aaKnown RBP10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CENPAP49450 140 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 SOX8P57073 446 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 ADRM1Q16186 407 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 RNF220Q5VTB9 566 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CCDC80Q76M96 950 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 SULF2Q8IWU5 870 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PQLC1Q8N2U9 271 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR6T1Q8NGN1 323 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 PAQR8Q8TEZ7 354 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 TMEM5Q9Y2B1 443 aa10.17□□□□□ -0.78
TNFAIP3-201ENST00000237289 CDHR4A6H8M9 788 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 C1QCP02747 245 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 MVDP53602 400 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 MAPK14Q16539 360 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 TMEM176BQ3YBM2 270 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 FBXW10Q5XX13 1052 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 TMEM225Q6GV28 225 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 DESI1Q6ICB0 168 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR2M7Q8NG81 312 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 NAA11Q9BSU3 229 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR5F1O95221 314 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 TPOP07202 933 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 CRYZQ08257 329 aaKnown RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 PPP1R8Q12972 351 aaKnown RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 WLSQ5T9L3 541 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 NANOGNBQ7Z5D8 188 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 ST8SIA1Q92185 356 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 SARAFQ96BY9 339 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 IL1RAPQ9NPH3 570 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 IMPAD1Q9NX62 359 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 TUBA8Q9NY65 449 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 ANKUB1A6NFN9 424 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 SULT2B1O00204 365 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR2T1O43869 369 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 POU2F1P14859 743 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 CBLP22681 906 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 SLC1A3P43003 542 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 OLAHQ9NV23 265 aa10.16□□□□□ -0.78
TNFAIP3-201ENST00000237289 SDK2Q58EX2 2172 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 TMED7-TICAM2A0A0A6YYA0 188 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 EIF1AYO14602 144 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 MAN1A2O60476 641 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 APOBEC1P41238 236 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 EIF1AXP47813 144 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 CSNK2A1P68400 391 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZNF117Q03924 483 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 SLC34A1Q06495 639 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 MFSD13AQ14CX5 517 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR10G2Q8NGC3 310 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 OR5M1Q8NGP8 315 aa10.15□□□□□ -0.78
TNFAIP3-201ENST00000237289 ZBTB8AQ96BR9 441 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms