RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GET4Q7L5D6 327 aaPredicted RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 LSMEM1Q8N8F7 131 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 HMGB4Q8WW32 186 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PIGKQ92643 395 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MARVELD3Q96A59 401 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 KCTD12Q96CX2 325 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 C1QTNF2Q9BXJ5 285 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 TEX12Q9BXU0 123 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ANKRD19PQ9H560 264 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 METTL17Q9H7H0 456 aaPredicted RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MBNL1Q9NR56 388 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 TMEM74BQ9NUR3 256 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SPHK1Q9NYA1 384 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 TRABD2BA6NFA1 517 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SSNA1O43805 119 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 OR5F1O95221 314 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 H2AFB2P0C5Z0 115 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 POLR2CP19387 275 aaPredicted RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 FOXK2Q01167 660 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 TCEA2Q15560 299 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 GPR68Q15743 365 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 TMEM44Q2T9K0 475 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 STPG1Q5TH74 334 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PRAMEF8Q5VWM4 474 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PRAMEF7Q5VXH5 474 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 CDC73Q6P1J9 531 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 NLRC3Q7RTR2 1065 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 KANSL1Q7Z3B3 1105 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 KCT2Q8NC54 265 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 ADAMTS15Q8TE58 950 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 HGDQ93099 445 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 RSPRY1Q96DX4 576 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 NDC1Q9BTX1 674 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 RBCK1Q9BYM8 510 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 SYNDIG1Q9H7V2 258 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 BRD7Q9NPI1 651 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 KLHL28Q9NXS3 571 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MRPL39Q9NYK5 338 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 ZNF224Q9NZL3 707 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 OR6C2Q9NZP2 312 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 KCNE5Q9UJ90 142 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MAFFQ9ULX9 164 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 PPIEQ9UNP9 301 aaKnown RBP11.5□□□□□ -0.57
NUP88-201ENST00000225696 KCNK6Q9Y257 313 aa11.5□□□□□ -0.57
NUP88-201ENST00000225696 MT-ND5P03915 603 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 RAB3BP20337 219 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 MPIP34949 423 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 P2RY2P41231 377 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 MAGEB1P43366 347 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 MMP15P51511 669 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 KLF9Q13886 244 aaPredicted RBP11.49□□□□□ -0.57
NUP88-201ENST00000225696 GRK1Q15835 563 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 DUSP5Q16690 384 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 COL28A1Q2UY09 1125 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 TP53I3Q53FA7 332 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 GID4Q8IVV7 300 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 MS4A15Q8N5U1 240 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 OR51A7Q8NH64 312 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 BRIX1Q8TDN6 353 aaKnown RBP11.49□□□□□ -0.57
NUP88-201ENST00000225696 ADAMTS14Q8WXS8 1223 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 IFT27Q9BW83 186 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 ACTRT3Q9BYD9 372 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 CHIAQ9BZP6 476 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 PCBD2Q9H0N5 130 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 TMEM168Q9H0V1 697 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 WSB2Q9NYS7 404 aaPredicted RBP11.49□□□□□ -0.57
NUP88-201ENST00000225696 CXXC1Q9P0U4 656 aaPredicted RBP11.49□□□□□ -0.57
NUP88-201ENST00000225696 SATB2Q9UPW6 733 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
NUP88-201ENST00000225696 AK6Q9Y3D8 172 aaKnown RBP11.49□□□□□ -0.57
NUP88-201ENST00000225696 A0A087WV48 116 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 PEX12O00623 359 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 LYPD3O95274 346 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 SBK2P0C263 348 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 EPXP11678 715 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 ADH5P11766 374 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 PTHLHP12272 177 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 PEBP1P30086 187 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 IKZF1Q13422 519 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 SNTB2Q13425 540 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 CRMP1Q14194 572 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 HNRNPA1L2Q32P51 320 aaKnown RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 DMKNQ6E0U4 476 aaPredicted RBP11.48□□□□□ -0.57
NUP88-201ENST00000225696 FAAH2Q6GMR7 532 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 HEPHL1Q6MZM0 1159 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 MFSD12Q6NUT3 480 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 CNKSR3Q6P9H4 555 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 GJD3Q8N144 294 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 LNX2Q8N448 690 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 OR2L5Q8NG80 312 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 OR11G2Q8NGC1 345 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
NUP88-201ENST00000225696 NXPE2Q96DL1 559 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms