RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 FBXO42Q6P3S6 717 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 DGLUCYQ7Z3D6 616 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR4N5Q8IXE1 308 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR13C2Q8NGS9 318 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR4C6Q8NH72 309 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SCMH1Q96GD3 660 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR2M4Q96R27 311 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR2A5Q96R48 311 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ABHD1Q96SE0 405 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ERVMER34-1Q9H9K5 563 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 STMN3Q9NZ72 180 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 PRR23AA6NEV1 266 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 FZD7O75084 574 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 PTP4A3O75365 173 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ATP1B1P05026 303 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
SRP54-201ENST00000216774 SLC16A1P53985 500 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF85Q03923 595 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SLC3A1Q07837 685 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 RUNX2Q13950 521 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 KIR2DS3Q14952 304 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 BCL2L15Q5TBC7 163 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 C9orf62Q8N4C0 152 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 COX18Q8N8Q8 333 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ANGPTL6Q8NI99 470 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ZNF559Q9BR84 538 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 OR51V1Q9H2C8 321 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 SRMSQ9H3Y6 488 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 LYRM4Q9HD34 91 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 EMC7Q9NPA0 242 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 TBC1D29Q9UFV1 150 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 KCNE5Q9UJ90 142 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 NUBP2Q9Y5Y2 271 aa12.32□□□□□ -0.44
SRP54-201ENST00000216774 PRSS38A1L453 326 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 J3QLW9 94 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 PEX12O00623 359 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 TNFSF14O43557 240 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SERPINA3P01011 423 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 APODP05090 189 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 IFI6P09912 130 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 IL9P15248 144 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ZNF19P17023 458 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 STOMP27105 288 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SNRPNP63162 240 aaKnown RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 PITPNAQ00169 270 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SLC36A2Q495M3 483 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ACSM3Q53FZ2 586 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 TANGO2Q6ICL3 276 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ABHD13Q7L211 337 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 C17orf47Q8NEP4 570 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ZCCHC10Q8TBK6 192 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SMPDL3BQ92485 455 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 FAM131CQ96AQ9 280 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ADAP2Q9NPF8 381 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 POLE3Q9NRF9 147 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 NUDT15Q9NV35 164 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 PTTG3PQ9NZH4 202 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 P2RX6O15547 441 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 NARSO43776 548 aaKnown RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 RFPL3O75679 317 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 UBL3O95164 117 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 PEPDP12955 493 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 RAB3BP20337 219 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 NOS3P29474 1203 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 OR12D2P58182 307 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
SRP54-201ENST00000216774 GAS6Q14393 721 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 FCN2Q15485 313 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 FAM205BPQ63HN1 556 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 ANKRD54Q6NXT1 300 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 BAIAP2L2Q6UXY1 529 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 KRT74Q7RTS7 529 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 FLVCR1-AS1Q8TAF5 88 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 GHSRQ92847 366 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 NECTIN4Q96NY8 510 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SRP54-201ENST00000216774 TWSG1Q9GZX9 223 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms