RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MAKP20794 623 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 PPP3R1P63098 170 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 ARHGAP11BQ3KRB8 267 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 USP53Q70EK8 1073 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 DACT3Q96B18 629 aaPredicted RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 PTCHD1Q96NR3 888 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 RBFOX1Q9NWB1 397 aaKnown RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 H2AFY2Q9P0M6 372 aaPredicted RBP12.17□□□□□ -0.46
CTNS-201ENST00000046640 HCN3Q9P1Z3 774 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 EXTL2Q9UBQ6 330 aa12.17□□□□□ -0.46
CTNS-201ENST00000046640 C2orf74A8MZ97 194 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 TNFP01375 233 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 ELK1P19419 428 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 GABRA5P31644 462 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SRP9P49458 86 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 MAT1AQ00266 395 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 RAB40BQ12829 278 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR1Q1Q15612 314 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SIGIRRQ6IA17 410 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 MTFR2Q6P444 385 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 MBOAT2Q6ZWT7 520 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR5H6Q8NGV6 325 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SUN5Q8TC36 379 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 HCAR1Q9BXC0 346 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 TRAV27A0A087WT01 109 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 A0A0A6YYC8 382 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 A0A1W2PPK0 400 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 I3L1I5 382 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 STX11O75558 287 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 REM1O75628 298 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SYPP08247 313 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 MRPL3P09001 348 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 ZGLP1P0C6A0 271 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SAGP10523 405 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 AGFG1P52594 562 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 TPBGQ13641 420 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 DECR1Q16698 335 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 ZNF620Q6ZNG0 422 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 PARGQ86W56 976 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 CYB561A3Q8NBI2 242 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 OSTF1Q92882 214 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 TPSD1Q9BZJ3 242 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR51V1Q9H2C8 321 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 UBQLN3Q9H347 655 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SCML1Q9UN30 329 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 C19orf53Q9UNZ5 99 aaPredicted RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 MRPS7Q9Y2R9 242 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 CYR61O00622 381 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 TNFSF14O43557 240 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR10H2O60403 315 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 GPR75O95800 540 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 CRYZL1O95825 349 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 IGHV4-34P06331 123 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 ARSBP15848 533 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 FPR3P25089 353 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 EVX1P49640 407 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 EEF1A1P68104 462 aaKnown RBP12.16□□□□□ -0.46
CTNS-201ENST00000046640 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 PRAMEF8Q5VWM4 474 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 PRAMEF7Q5VXH5 474 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 SIRT6Q8N6T7 355 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR2T33Q8NG76 320 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR52R1Q8NGF1 315 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR13C2Q8NGS9 318 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 OR52D1Q9H346 318 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 PIGUQ9H490 435 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 BEX1Q9HBH7 125 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 IL20Q9NYY1 176 aa12.16□□□□□ -0.46
CTNS-201ENST00000046640 ICMTO60725 284 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 GYPBP06028 91 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 THEGLP0DJG4 465 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 CLUP10909 449 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 DRD1P21728 446 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 UQCRC1P31930 480 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 GZMKP49863 264 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 P2RX3P56373 397 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 HHEXQ03014 270 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 BCL2L15Q5TBC7 163 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 FAM205BPQ63HN1 556 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 GRPEL2Q8TAA5 225 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ZFAND1Q8TCF1 268 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 CNOT9Q92600 299 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms