RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PRICKLE2Q7Z3G6 844 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 NLRP8Q86W28 1048 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 BPIFA2Q96DR5 249 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 COX14Q96I36 57 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 PRRC1Q96M27 445 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 KLRF1Q9NZS2 232 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 GRHPRQ9UBQ7 328 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
CHPF2-201ENST00000035307 LRRN3E7EW58 273 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 G3V3Y1 287 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 HMGN4O00479 90 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SEMA3DO95025 777 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 PEPDP12955 493 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 APEHP13798 732 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 APEX1P27695 318 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 CLDN12P56749 244 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 DCST2Q5T1A1 773 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 BICRALQ6AI39 1079 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 C1orf94Q6P1W5 598 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SYT9Q86SS6 491 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 PLXDC1Q8IUK5 500 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 LACC1Q8IV20 430 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SIMC1Q8NDZ2 872 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 OR6C4Q8NGE1 309 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 LRRN3Q9H3W5 708 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 NFKBIL1Q9UBC1 381 aaPredicted RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 MRTO4Q9UKD2 239 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 PTPRDP23468 1912 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 FAM221BA6H8Z2 402 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 MEIS3P1A6NDR6 274 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 FLRT2O43155 660 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 CCKBRP32239 447 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 STAT5AP42229 794 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 MAP2K3P46734 347 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 NR0B1P51843 470 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 REEP5Q00765 189 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 ZP2Q05996 745 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SEC23BQ15437 767 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 SLC22A18ASQ8N1D0 253 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 C19orf47Q8N9M1 422 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 OR6C1Q96RD1 312 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 POT1Q9NUX5 634 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 LAMP5Q9UJQ1 280 aa11.21□□□□□ -0.61
CHPF2-201ENST00000035307 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
CHPF2-201ENST00000035307 PRODHO43272 600 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 KRT33AO76009 404 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 RENP00797 406 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 CD3GP09693 182 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 RAE1P78406 368 aaKnown RBP11.21□□□□□ -0.62
CHPF2-201ENST00000035307 CARD17Q5XLA6 110 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 LEG1Q6P5S2 330 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 ZER1Q7Z7L7 766 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 TMPRSS12Q86WS5 348 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 ZFPM2Q8WW38 1151 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 COMMD4Q9H0A8 199 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 ERVK-11Q9UQG0 969 aa11.21□□□□□ -0.62
CHPF2-201ENST00000035307 A0A087WUU8 490 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 H3BML4 177 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 DNAJB5O75953 348 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 GABARAPO95166 117 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 MAP3K8P41279 467 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 KCNJ5P48544 419 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 HCCSP53701 268 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 LIM2P55344 173 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 CTXN1P60606 82 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 PGBD2Q6P3X8 592 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 PCNPQ8WW12 178 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 TAPBPLQ9BX59 468 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SLAMF7Q9NQ25 335 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 ANKRD10Q9NXR5 420 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 VDAC3Q9Y277 283 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 PADI2Q9Y2J8 665 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 UPK1AO00322 258 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 HEXBP07686 556 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 CHRM4P08173 479 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 FBLP22087 321 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 RPS27P42677 84 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 CXCR4P61073 352 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 DUSP5Q16690 384 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 INAVAQ3KP66 663 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SLC46A3Q7Z3Q1 461 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SHISA5Q8N114 240 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 ACOT11Q8WXI4 607 aaPredicted RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 GAL3ST3Q96A11 431 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 C8orf44Q96CB5 159 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms