RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
RTFDC1-201ENST00000023939 A0A087WUJ7 227 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 SCDO00767 359 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 BHLHE40O14503 412 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 HCN1O60741 890 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 SCRG1O75711 98 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 IGF2P01344 180 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 FGF5P12034 268 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 RGS6P49758 472 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 DCDP81605 110 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 OCA2Q04671 838 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 PWWP2BQ6NUJ5 590 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 NANOGP1Q8N7R0 232 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 TBC1D15Q8TC07 691 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 CLIP3Q96DZ5 547 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 NECAB3Q96P71 396 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 MGLLQ99685 303 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC19A3Q9BZV2 496 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 WWTR1Q9GZV5 400 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 BAIAP2Q9UQB8 552 aa13.15□□□□□ -0.3
RTFDC1-201ENST00000023939 A0A1W2PQD3 144 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 TSPAN2O60636 221 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 RFPL3O75679 317 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 TIAF1O95411 115 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 RAB36O95755 333 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 BMP7P18075 431 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 UGT2B10P36537 528 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 LIMK1P53667 647 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 COPZ1P61923 177 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 DAB2P98082 770 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 SKP2Q13309 424 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 IL11RAQ14626 422 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 NXNL2Q5VZ03 156 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 SMARCD3Q6STE5 483 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC29A4Q7RTT9 530 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 OVCH1Q7RTY7 1134 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 LGALS12Q96DT0 336 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 PLEKHA8Q96JA3 519 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 OR5M11Q96RB7 305 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 GFM1Q96RP9 751 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 MND1Q9BWT6 205 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC26A1Q9H2B4 701 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 TAS2R16Q9NYV7 291 aa13.14□□□□□ -0.31
RTFDC1-201ENST00000023939 FER1L5A0AVI2 2057 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 CLPXO76031 633 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 UBL4AP11441 157 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 HPGDP15428 266 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 MTNR1AP48039 350 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 CD226Q15762 336 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 PPP1R3BQ86XI6 285 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 PRSS58Q8IYP2 241 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC34A3Q8N130 599 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 C3orf49Q96BT1 292 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 GPR52Q9Y2T5 361 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 D6RAR5 112 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 KPNA4O00629 521 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 ZNF264O43296 627 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 AIREO43918 545 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 PPM1BO75688 479 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 SCG5P05408 212 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 INHBBP09529 407 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 PNMTP11086 282 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 NR4A1P22736 598 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 HTR1FP30939 366 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 SLC6A8P48029 635 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 ZFP36L1Q07352 338 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 FHL1Q13642 323 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 SPHARQ15513 63 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 MOGQ16653 247 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 NDUFAF6Q330K2 333 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 APOOLQ6UXV4 268 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 HSDL2Q6YN16 418 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 LANCL3Q6ZV70 420 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 OR13C2Q8NGS9 318 aa13.13□□□□□ -0.31
RTFDC1-201ENST00000023939 DYNC2LI1Q8TCX1 351 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms