RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 GPR171O14626 319 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 TPOP07202 933 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 SAGP10523 405 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 SELENOPP49908 381 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 RPL6Q02878 288 aaKnown RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 CAMK2DQ13557 499 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 EXOSC2Q13868 293 aaKnown RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 GET4Q7L5D6 327 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 ZNF527Q8NB42 609 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 OR52L1Q8NGH7 329 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ZCCHC10Q8TBK6 192 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 GRHL3Q8TE85 626 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 SMPDL3BQ92485 455 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 RANBP3Q9H6Z4 567 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 EMC7Q9NPA0 242 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 SERGEFQ9UGK8 458 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 PHF11Q9UIL8 331 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
USH1C-201ENST00000005226 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
USH1C-201ENST00000005226 ZNF860A6NHJ4 632 aa13□□□□□ -0.33
USH1C-201ENST00000005226 PPP1R3DO95685 299 aa13□□□□□ -0.33
USH1C-201ENST00000005226 H2AFB2P0C5Z0 115 aa13□□□□□ -0.33
USH1C-201ENST00000005226 RAB3BP20337 219 aa13□□□□□ -0.33
USH1C-201ENST00000005226 RGS1Q08116 209 aa13□□□□□ -0.33
USH1C-201ENST00000005226 OR1Q1Q15612 314 aa13□□□□□ -0.33
USH1C-201ENST00000005226 GSG1Q2KHT4 349 aa13□□□□□ -0.33
USH1C-201ENST00000005226 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
USH1C-201ENST00000005226 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
USH1C-201ENST00000005226 FIGNL1Q6PIW4 674 aa13□□□□□ -0.33
USH1C-201ENST00000005226 LUZP2Q86TE4 346 aa13□□□□□ -0.33
USH1C-201ENST00000005226 GID4Q8IVV7 300 aa13□□□□□ -0.33
USH1C-201ENST00000005226 SERPINA12Q8IW75 414 aa13□□□□□ -0.33
USH1C-201ENST00000005226 OR2L3Q8NG85 312 aa13□□□□□ -0.33
USH1C-201ENST00000005226 TMEM239Q8WW34 195 aa13□□□□□ -0.33
USH1C-201ENST00000005226 PGLYRP3Q96LB9 341 aa13□□□□□ -0.33
USH1C-201ENST00000005226 SORCS2Q96PQ0 1159 aa13□□□□□ -0.33
USH1C-201ENST00000005226 MTHFD2LQ9H903 347 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 ADAP2Q9NPF8 381 aa13□□□□□ -0.33
USH1C-201ENST00000005226 OR6C2Q9NZP2 312 aa13□□□□□ -0.33
USH1C-201ENST00000005226 KCNN3Q9UGI6 736 aa13□□□□□ -0.33
USH1C-201ENST00000005226 ABHD14A-ACY1A0A1B0GW23 586 aa13□□□□□ -0.33
USH1C-201ENST00000005226 GNB5O14775 395 aa13□□□□□ -0.33
USH1C-201ENST00000005226 SHOXO15266 292 aa13□□□□□ -0.33
USH1C-201ENST00000005226 PLPP2O43688 288 aa13□□□□□ -0.33
USH1C-201ENST00000005226 GMDSO60547 372 aa13□□□□□ -0.33
USH1C-201ENST00000005226 SBK2P0C263 348 aa13□□□□□ -0.33
USH1C-201ENST00000005226 LINC00271P0C7V0 271 aa13□□□□□ -0.33
USH1C-201ENST00000005226 PTHLHP12272 177 aa13□□□□□ -0.33
USH1C-201ENST00000005226 DNASE1P24855 282 aa13□□□□□ -0.33
USH1C-201ENST00000005226 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 ZP1P60852 638 aa13□□□□□ -0.33
USH1C-201ENST00000005226 POU6F2P78424 691 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 ANGPT1Q15389 498 aa13□□□□□ -0.33
USH1C-201ENST00000005226 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
USH1C-201ENST00000005226 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
USH1C-201ENST00000005226 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
USH1C-201ENST00000005226 ZNF782Q6ZMW2 699 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 GJD3Q8N144 294 aa13□□□□□ -0.33
USH1C-201ENST00000005226 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 TRAF4Q9BUZ4 470 aaPredicted RBP13□□□□□ -0.33
USH1C-201ENST00000005226 RNF208Q9H0X6 261 aa13□□□□□ -0.33
USH1C-201ENST00000005226 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
USH1C-201ENST00000005226 ADGRL4Q9HBW9 690 aa13□□□□□ -0.33
USH1C-201ENST00000005226 DEC1Q9P2X7 70 aa13□□□□□ -0.33
USH1C-201ENST00000005226 MRPS23Q9Y3D9 190 aaKnown RBP13□□□□□ -0.33
USH1C-201ENST00000005226 NUBP2Q9Y5Y2 271 aa13□□□□□ -0.33
USH1C-201ENST00000005226 LINC00862A6NCI5 91 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 ZNF593O00488 134 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 ZNF888P0CJ79 500 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.33
USH1C-201ENST00000005226 NUDT1P36639 197 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 MTSS1LQ765P7 747 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 COMMD7Q86VX2 200 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 SLC44A3Q8N4M1 653 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 OR4E2Q8NGC2 313 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 ZMYND19Q96E35 227 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 SDF2Q99470 211 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 SPRTNQ9H040 489 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 CALML5Q9NZT1 146 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PPIEQ9UNP9 301 aaKnown RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 TRABD2BA6NFA1 517 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PSMD9O00233 223 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 IMPA2O14732 288 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 MID1O15344 667 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PRKACBP22694 351 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PSMB10P40306 273 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 SNTB2Q13425 540 aaKnown RBP12.99□□□□□ -0.33
USH1C-201ENST00000005226 FGL2Q14314 439 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PRAMEF8Q5VWM4 474 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 PRAMEF7Q5VXH5 474 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 FAAH2Q6GMR7 532 aa12.99□□□□□ -0.33
USH1C-201ENST00000005226 Q6ZTK2 550 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms