RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 SparcP07214 302 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gal3st2cQ3ULK5 396 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Epha5Q60629 876 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Il10raQ61727 575 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Il17fQ7TNI7 161 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gpr119Q7TQP3 335 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1197Q7TR13 314 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Kctd20Q8CDD8 419 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1417Q8VGJ6 315 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Spcs2Q9CYN2 226 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zdhhc4Q9D6H5 343 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn1r10W4VSP8 311 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cd300ld4A2A7W1 245 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Kcnmb3E9Q7U0 239 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc16a5G5E8K6 468 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Prdx4O08807 274 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cacng2O88602 323 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 TyrP11344 533 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 CfpP11680 464 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 FurinP23188 793 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Apoc1P34928 88 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 CtseP70269 397 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Usp22Q5DU02 525 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cd300ld3Q6SJQ5 245 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1196Q7TR14 314 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zfp184Q7TSH9 737 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmbim1Q8BJZ3 309 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Stk-ps2Q8C0V7 499 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Emc1Q8C7X2 997 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmem268Q8R239 342 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr807Q8VGI9 311 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 TipinQ91WA1 278 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Macrod1Q922B1 323 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Bud23Q9CY21 281 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Srfbp1Q9CZ91 441 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 C1qtnf2Q9D8U4 294 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cdh20Q9Z0M3 801 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Oasl2Q9Z2F2 508 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm5788A0A1Y7VK80 144 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fthl17bA2AHC5 176 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fthl17cA2AHC6 176 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Scgb1b30A2BH64 92 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr115B2RTB9 312 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Shisa8J3QNX5 399 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm3685J3QPP2 205 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r13L7N1X2 831 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fthl17dQ3SXD1 176 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fthl17fQ3SXD2 176 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Nxt2Q3UNA4 142 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 FcrlbQ5DRQ8 427 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc35g3Q5F297 340 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Kmt5cQ6Q783 468 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 TifaQ793I8 184 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Zim1Q8C393 579 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Fthl17Q99MX2 176 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Ca7Q9ERQ8 264 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm21936A0A1Y7VJE9 144 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Gm4907B1AXB9 411 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r92L7N2A4 860 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Phb2O35129 299 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Smad6O35182 495 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Bloc1s1O55102 125 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Sp1O89090 784 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cdk1P11440 297 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Mbl2P41317 244 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Lrrc3P59034 257 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Grhl3Q5FWH3 603 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rnf215Q5SPX3 379 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Sox19Q62249 55 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1312Q8VF10 317 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Hint3Q9CPS6 165 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Nrip3Q9JJR9 240 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cd163l1A0A1B0GSB0 991 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Aadacl2B2RWD2 401 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 RfngO09009 332 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 H2-Q10P01898 325 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Slc6a11P31650 627 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Cd38P56528 304 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 KcnrgQ2TUM3 264 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Tmem104Q3TB48 496 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Rftn1Q6A0D4 554 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Prr14Q7TPN9 612 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1275Q7TQY8 312 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Clec18aQ7TSQ1 534 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 NagpaQ8BJ48 517 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Mettl7a1Q8C6B0 244 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Hspa12aQ8K0U4 675 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr1100Q8VFM1 321 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Olfr398Q8VFY0 314 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Smarcd2Q99JR8 531 aaKnown RBP9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Stard5Q9EPQ7 213 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Nkx2-4Q9EQM3 354 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Esp18A8R0V1 91 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Vmn2r98E9PZ56 857 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 NnmtO55239 264 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Kcnk4O88454 398 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Lef1P27782 397 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 DmwdQ08274 665 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 EgflamQ4VBE4 1017 aa9.28□□□□□ -0.92
Syne1-201ENSMUST00000041639 Csnk2a1Q60737 391 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms