RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pebp4Q9D9G2 242 aa12.55□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc9a6A1L3P4 702 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r75G5E8Z7 853 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Plscr5J3QM92 274 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ccrl2O35457 360 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 FshrP35378 692 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 TesP47226 423 aaKnown RBP12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc12a3P59158 1002 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Btg1P62325 171 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fxyd2Q04646 70 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm136Q3V037 328 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Laptm5Q61168 261 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Lcn3Q62471 182 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Runx3Q64131 409 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tpgs2Q66JT5 296 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 DraxinQ6PAL1 343 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm9881Q8BR56 211 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ncr1Q8C567 325 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Zbtb26Q8C8S0 451 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Hpf1Q8CFE2 346 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Galnt18Q8K1B9 622 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Anapc10Q8K2H6 185 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Art3Q8R2G4 371 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Laptm4bQ91XQ6 227 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Steap1Q9CWR7 339 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fam3bQ9D309 235 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc22a17Q9D9E0 401 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pfn3Q9DAD6 137 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tmem27Q9ESG4 222 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sorcs1Q9JLC4 1167 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm4924A0A1B0GR71 966 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 A0A1Y7VIU7 259 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm13124A2A752 406 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm13078A2AGW8 474 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm266A6H634 200 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Ssxa1B1AUS7 101 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cldn20G5E8X0 219 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Btg4O70552 250 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gas2P11862 314 aaKnown RBP12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gsx2P31316 305 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gstm5P48774 224 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Acp5Q05117 327 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Glrx5Q80Y14 152 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm9758Q80ZT2 255 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rgp1Q8BHT7 391 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cdkl3Q8BLF2 595 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 C1qtnf7Q8BVD7 289 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Klhl31Q8BWA5 634 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 H2afy2Q8CCK0 372 aaKnown RBP12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dcun1d3Q8K0V2 304 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Lrrc3bQ8VCH9 259 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Hyal3Q8VEI3 412 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr164Q8VF87 315 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr45Q8VGM1 311 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rpe65Q91ZQ5 533 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gnpda2Q9CRC9 276 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gdpd1Q9CRY7 314 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Thsd1Q9JM61 851 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Dnaja4Q9JMC3 397 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cyp11a1Q9QZ82 526 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Asic5Q9R0Y1 495 aa12.54□□□□□ -0.4
Nup88-201ENSMUST00000035283 Rpl7a-ps5A0A140T8L3 268 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Wdr76A6PWY4 622 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm572B1ARY8 399 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 TmppeD3Z286 447 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm3755K7N743 167 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 CcnkO88874 554 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 OtcP11725 354 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Cfl1P18760 166 aaKnown RBP12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Mc3rP33033 323 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Egfbp2P36368 261 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Crhr2Q60748 411 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 HpQ61646 347 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Klk8Q61955 260 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nsg1Q62092 185 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 BocQ6AZB0 1110 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 PianpQ6P1B3 278 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Sult2a8Q8BGL3 282 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Znf592Q8BHZ4 1262 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Pou6f2Q8BJI4 691 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Kctd20Q8CDD8 419 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Slc31a1Q8K211 196 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Tctn3Q8R2Q6 595 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Nxnl1Q8VC33 217 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Olfr1048Q8VGS2 320 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Raf1Q99N57 648 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 UqcrbQ9D855 111 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Bmp10Q9R229 421 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Gm20671F6TVX7 576 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Vmn2r109K7N747 858 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Spsb2O88838 264 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Hsd3b3P26150 373 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 TpoP35419 914 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Fabp5Q05816 135 aaKnown RBP12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Apcdd1Q3U128 514 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 AhrrQ3U1U7 701 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Brf2Q3UAW9 420 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Klf2Q60843 354 aaKnown RBP12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Acvr1bQ61271 505 aa12.53□□□□□ -0.4
Nup88-201ENSMUST00000035283 Prg2Q61878 223 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms