RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OR13C5Q8NGS8 318 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 HS6ST2Q96MM7 605 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 MS4A4EQ96PG1 132 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 TEAD3Q99594 435 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 PHPT1Q9NRX4 125 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 KCMF1Q9P0J7 381 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 ARHGEF9O43307 516 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CHP2O43745 196 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 LYPD3O95274 346 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 AHCYP23526 432 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 OR12D2P58182 307 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 FOXK2Q01167 660 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 OR1Q1Q15612 314 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 ARHGAP11BQ3KRB8 267 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 GID4Q8IVV7 300 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CYB561A3Q8NBI2 242 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CD180Q99467 661 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 SMAD5Q99717 465 aaKnown RBP12.83□□□□□ -0.36
PHGDH-233ENST00000642021 TIMM29Q9BSF4 260 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 CLEC4AQ9UMR7 237 aa12.83□□□□□ -0.36
PHGDH-233ENST00000642021 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 MAGEB4O15481 346 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RFPL3O75679 317 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 GYPBP06028 91 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 CMPK1P30085 196 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RFX3P48380 749 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 PITPNBP48739 271 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 ATP12AP54707 1039 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 P2RX3P56373 397 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RPS7P62081 194 aaKnown RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RUNX2Q13950 521 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 DEFB134Q4QY38 66 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 LNX2Q8N448 690 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 OR13C2Q8NGS9 318 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 LILRB1Q8NHL6 650 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 ZCCHC10Q8TBK6 192 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TMEM239Q8WW34 195 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RAB11FIP5Q9BXF6 653 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 NTMQ9P121 344 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 A0A0B4J203 849 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 A0A1W2PPK0 400 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 SLC9B1P1A6NJY1 282 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 GPR89AB7ZAQ6 455 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 J3QLW9 94 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 GPR89BP0CG08 455 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 ZNF19P17023 458 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 BMP7P18075 431 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 HK1P19367 917 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 NPR2P20594 1047 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 MAT2AP31153 395 aaKnown RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TSFMP43897 325 aaKnown RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 VEGFBP49765 207 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 PLAURQ03405 335 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 DUSP8Q13202 625 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 SLC36A2Q495M3 483 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 RNASE12Q5GAN4 147 aaKnown RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 MRPL2Q5T653 305 aaKnown RBP12.82□□□□□ -0.36
PHGDH-233ENST00000642021 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 SSX6Q7RTT6 188 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TIGD4Q8IY51 512 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 GHDCQ8N2G8 530 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 C9orf62Q8N4C0 152 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 OR5H6Q8NGV6 325 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 FGF13Q92913 245 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 C4orf36Q96KX1 117 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 SLC17A4Q9Y2C5 497 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 STON1Q9Y6Q2 735 aa12.82□□□□□ -0.36
PHGDH-233ENST00000642021 ATG2BQ96BY7 2078 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TRBV23OR9-2A0A075B6M9 112 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TRAV27A0A087WT01 109 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PLPP2O43688 288 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 KAT7O95251 611 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 GJA4P35212 333 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TALDO1P37837 337 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 HCCSP53701 268 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 ZNF85Q03923 595 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 MRPL28Q13084 256 aaKnown RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PDGFRLQ15198 375 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 VITQ6UXI7 678 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PAQR7Q86WK9 346 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 RFLNBQ8N5W9 214 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR4D9Q8NGE8 314 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 OR51A7Q8NH64 312 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
PHGDH-233ENST00000642021 PGLYRP3Q96LB9 341 aa12.81□□□□□ -0.36
PHGDH-233ENST00000642021 IFT27Q9BW83 186 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 535.1 ms