RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 H0YHG0 523 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ENTPD5O75356 428 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 PRKD3O94806 890 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 CLDN14O95500 239 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 OXSR1O95747 527 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-228ENST00000641847 GPIP06744 558 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 NGFRP08138 427 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 HPGDP15428 266 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 IL7RP16871 459 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 TBXA2RP21731 343 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
PHGDH-228ENST00000641847 EVI2BP34910 448 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 KCNJ5P48544 419 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 EEF1A1P68104 462 aaKnown RBP8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ARG2P78540 354 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 LARS2Q15031 903 aaKnown RBP8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF141Q15928 474 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-228ENST00000641847 GLIPR1L2Q4G1C9 344 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 RNF220Q5VTB9 566 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 DHRS4L2Q6PKH6 230 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ISLR2Q6UXK2 745 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 IL20RBQ6UXL0 311 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 NUP54Q7Z3B4 507 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 VTCN1Q7Z7D3 282 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 GPALPP1Q8IXQ4 340 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 FAM86B1Q8N7N1 296 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 GPR32P1Q8NGA4 272 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 OR10Q1Q8NGQ4 319 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 OR4C3Q8NH37 302 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 PMM1Q92871 262 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ZG16BQ96DA0 208 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 TMCO6Q96DC7 493 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 SLC47A1Q96FL8 570 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 NODALQ96S42 347 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ANKRD10Q9NXR5 420 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 SH3BGRL2Q9UJC5 107 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 SLC13A4Q9UKG4 626 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 BAG5Q9UL15 447 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 ABCG2Q9UNQ0 655 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 DOCK10Q96BY6 2186 aa8.58□□□□□ -1.04
PHGDH-228ENST00000641847 TRAV17A0A0B4J275 112 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SERINC4A6NH21 518 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 CLDN24A6NM45 220 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SYT5O00445 386 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TP53I11O14683 189 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SCO2O43819 266 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TPST1O60507 370 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 F10P00742 488 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 NID1P14543 1247 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TNFRSF1BP20333 461 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 CLK3P49761 638 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 HLCSP50747 726 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SELENOWP63302 87 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 RPP38P78345 283 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 ELF3P78545 371 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 OC90Q02509 493 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 MFAP5Q13361 173 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 FGFBP1Q14512 234 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 DUSP7Q16829 419 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 FAM98BQ52LJ0 330 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 IFI44LQ53G44 452 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 KLHL26Q53HC5 615 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 EIPR1Q53HC9 387 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 MRPL2Q5T653 305 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF468Q5VIY5 522 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 AP1ARQ63HQ0 302 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 MEX3BQ6ZN04 569 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 RTL4Q6ZR62 310 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 FKBP9P1Q75LS8 142 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 COMTD1Q86VU5 262 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TGIF2LYQ8IUE0 185 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 ADGRG5Q8IZF4 528 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 CYP4Z2PQ8N1L4 340 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 GATSQ8NAP1 163 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 GOLM1Q8NBJ4 401 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 POGLUT1Q8NBL1 392 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 VANGL1Q8TAA9 524 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 CANT1Q8WVQ1 401 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 GEMIN6Q8WXD5 167 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 LZICQ8WZA0 190 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 PROX1Q92786 737 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 STMN2Q93045 179 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 POP5Q969H6 163 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 PYURFQ96I23 114 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SEPHS2Q99611 448 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 ARHGDIGQ99819 225 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 UTP23Q9BRU9 249 aaKnown RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 DOHHQ9BU89 302 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 RSPO3Q9BXY4 272 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 UGT2B28Q9BY64 529 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 TBL1XR1Q9BZK7 514 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 MAGIXQ9H6Y5 334 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 METTL7AQ9H8H3 244 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 SH2D2AQ9NP31 389 aa8.57□□□□□ -1.04
PHGDH-228ENST00000641847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-228ENST00000641847 KLRF1Q9NZS2 232 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms