RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NLE1Q9NVX2 485 aaPredicted RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 ZNF536O15090 1300 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 TRAF3IP2O43734 574 aaPredicted RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 TRAPPC6AO75865 159 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 OR12D1P0DN82 309 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 MGST1P10620 155 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 GABRB3P28472 473 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 VIPR1P32241 457 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 INTS5Q6P9B9 1019 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 PPP1R3BQ86XI6 285 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 FAM213BQ8TBF2 198 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 PAPOLGQ9BWT3 736 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 CACNG3O60359 315 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 CRHBPP24387 322 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 GJA5P36382 358 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 RPS15AP62244 130 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 CAMK2BQ13554 666 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 NKPD1Q17RQ9 610 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 LOC730098B7Z3J9 87 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 MAT2AP31153 395 aaKnown RBP14.28□□□□□ -0.12
UBE3A-227ENST00000638011 CXADRP78310 365 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 GALNT2Q10471 571 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 PLGLAQ15195 96 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 GRIK5Q16478 980 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 OR1S2Q8NGQ3 325 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 THSD1Q9NS62 852 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 CUTCQ9NTM9 273 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 PTPRMP28827 1452 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 KDELR3O43731 214 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 SGSHP51688 502 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 NDUFA6P56556 154 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 WDR18Q9BV38 432 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
UBE3A-227ENST00000638011 SURF4O15260 269 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 TNFSF4P23510 183 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 LRIT3Q3SXY7 679 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 SLX4IPQ5VYV7 408 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 OR56B1Q8NGI3 324 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 NSUN3Q9H649 340 aaKnown RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 CRLF2Q9HC73 371 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 DUSP22Q9NRW4 184 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 DCAF13Q9NV06 445 aaKnown RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 GABARAPH6UMI1 98 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 SCAMP2O15127 329 aaKnown RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 GABARAPO95166 117 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 ADORA3P0DMS8 318 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 CD1EP15812 388 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 FUT4P22083 530 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 CLRN3Q8NCR9 226 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 OR14L1PQ8NHC6 308 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 L3HYPDHQ96EM0 354 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 WDR77Q9BQA1 342 aaPredicted RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 OR10A5Q9H207 317 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 OR10A2Q9H208 303 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 ENPP3O14638 875 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 NDUFB2O95178 105 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 C1QBP02746 253 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 ZNF791Q3KP31 576 aaPredicted RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 TMEM244Q5VVB8 128 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 VASH1Q7L8A9 365 aaPredicted RBP14.27□□□□□ -0.12
UBE3A-227ENST00000638011 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 ZDHHC11Q9H8X9 412 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 ACKR4Q9NPB9 350 aa14.27□□□□□ -0.12
UBE3A-227ENST00000638011 TGM5O43548 720 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 TMEM225BP0DP42 221 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 SLC7A9P82251 487 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 OR52E2Q8NGJ4 325 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 NPRL2Q8WTW4 380 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 RANBP9Q96S59 729 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CNR2P34972 360 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CLDN6P56747 220 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF620Q6ZNG0 422 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 PTBP3O95758 552 aaKnown RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 ACPPP15309 386 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 PPP1R8Q12972 351 aaKnown RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 TECRLQ5HYJ1 363 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A6P0DMU7 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A5P0DMU8 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A7P0DMV0 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A8P0DMV1 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A9P0DMV2 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 FOLR1P15328 257 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 FASLGP48023 281 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 SLC25A11Q02978 314 aaKnown RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 PDGFRLQ15198 375 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 ARHGAP11BQ3KRB8 267 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A2Q5DJT8 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 CT45A1Q5HYN5 189 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 HENMT1Q5T8I9 393 aaKnown RBP14.27□□□□□ -0.13
UBE3A-227ENST00000638011 WDR88Q6ZMY6 472 aa14.27□□□□□ -0.13
UBE3A-227ENST00000638011 TAS1R3Q7RTX0 852 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms