RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SHFQ7M4L6 423 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 ZNF761Q86XN6 746 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 ZNF614Q8N883 585 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 TSTD1Q8NFU3 115 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 OR51G2Q8NGK0 314 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 PFN4Q8NHR9 129 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 SPRYD4Q8WW59 207 aaPredicted RBP11.22□□□□□ -0.61
CLN8-212ENST00000637083 DGAT2Q96PD7 388 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 FAM60AQ9NP50 221 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 SLC35A3Q9Y2D2 325 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 V9GYH0 126 aa11.22□□□□□ -0.61
CLN8-212ENST00000637083 NPIPA5A0A0B4J1W7 369 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 FABP12A6NFH5 140 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SLC9B1P1A6NJY1 282 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 NPIPA7E9PJI5 369 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SOCS6O14544 535 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 MSL3P1P0C860 447 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 NPIPA8P0DM63 369 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ZNF3P17036 446 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 HK1P19367 917 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 CELP19835 753 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 GALNSP34059 522 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 TAS2R43P59537 309 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ACTC1P68032 377 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ACTA1P68133 377 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 PSG6Q00889 435 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 FOXK2Q01167 660 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 FABP5Q01469 135 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 POU4F2Q12837 409 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ZNF141Q15928 474 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 TCTE1Q5JU00 501 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 PDZK1Q5T2W1 519 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 DESI1Q6ICB0 168 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 METAP1DQ6UB28 335 aaPredicted RBP11.21□□□□□ -0.61
CLN8-212ENST00000637083 GDPD3Q7L5L3 318 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 AKAP14Q86UN6 197 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SFTPA2Q8IWL1 248 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 LAX1Q8IWV1 398 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 GPALPP1Q8IXQ4 340 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ARHGEF39Q8N4T4 335 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 C7orf57Q8NEG2 295 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SLC2A12Q8TD20 617 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 DOK4Q8TEW6 326 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 OIT3Q8WWZ8 545 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 NACC2Q96BF6 587 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 DIRAS2Q96HU8 199 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SDHCQ99643 169 aaPredicted RBP11.21□□□□□ -0.61
CLN8-212ENST00000637083 LRRC61Q9BV99 259 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 KATNB1Q9BVA0 655 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 ABCB9Q9NP78 766 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 BABAM2Q9NXR7 383 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 PLEKHB1Q9UF11 243 aaPredicted RBP11.21□□□□□ -0.61
CLN8-212ENST00000637083 EPHA6Q9UF33 1036 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 SIGLEC7Q9Y286 467 aa11.21□□□□□ -0.61
CLN8-212ENST00000637083 A0A0A6YYC8 382 aaPredicted RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 A0A1W2PQL4 384 aaPredicted RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 DAPL1A0PJW8 107 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 HTR3EA5X5Y0 456 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 LILRA5A6NI73 299 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 I3L1I5 382 aaPredicted RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 J3QRE1 110 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 SLC2A10O95528 541 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 PROS1P07225 676 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 S1PR1P21453 382 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 TBXA2RP21731 343 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 CAPZBP47756 277 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 RFX3P48380 749 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 TMED10P49755 219 aaKnown RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 GPR143P51810 404 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 PPP1CAP62136 330 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 FGFBP1Q14512 234 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 DEFB110Q30KQ9 67 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 ALG10BQ5I7T1 473 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 ARHGAP11AQ6P4F7 1023 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 ULK3Q6PHR2 472 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 WDR88Q6ZMY6 472 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 ZNF440Q8IYI8 595 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 ATP6V1C2Q8NEY4 427 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 BBS1Q8NFJ9 593 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 DNAJA4Q8WW22 397 aaPredicted RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 CCNL2Q96S94 520 aaPredicted RBP11.21□□□□□ -0.62
CLN8-212ENST00000637083 SLC38A3Q99624 504 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 TM9SF2Q99805 663 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 SRRQ9GZT4 340 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 RERGLQ9H628 205 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 TBC1D17Q9HA65 648 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 CAPN10Q9HC96 672 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 IL20RAQ9UHF4 553 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 PLCL2Q9UPR0 1127 aa11.21□□□□□ -0.62
CLN8-212ENST00000637083 A0A1B0GWA3 101 aa11.2□□□□□ -0.62
CLN8-212ENST00000637083 EFCAB7A8K855 629 aa11.2□□□□□ -0.62
CLN8-212ENST00000637083 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
CLN8-212ENST00000637083 ZNF749O43361 778 aa11.2□□□□□ -0.62
CLN8-212ENST00000637083 PTP4A3O75365 173 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms