RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 CHODLQ9H9P2 273 aa17.78■□□□□ 0.44
TARDBP-228ENST00000629725 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
TARDBP-228ENST00000629725 WBP11Q9Y2W2 641 aaKnown RBP17.78■□□□□ 0.44
TARDBP-228ENST00000629725 POLR3HQ9Y535 204 aaPredicted RBP17.78■□□□□ 0.44
TARDBP-228ENST00000629725 A0A1W2PQD3 144 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 H7C417 338 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 NUDT14O95848 222 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 CSF3P09919 207 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 IGHV1-2P23083 117 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 LCN1P31025 176 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 GZMKP49863 264 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 FAM120AOSQ5T036 256 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 FAM166AQ6J272 317 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 ATP6V1C2Q8NEY4 427 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 NUP43Q8NFH3 380 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 FBXO27Q8NI29 283 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 FBXO30Q8TB52 745 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 PAFAH2Q99487 392 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 COQ10BQ9H8M1 238 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 NINJ2Q9NZG7 142 aa17.77■□□□□ 0.44
TARDBP-228ENST00000629725 ING1Q9UK53 422 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-228ENST00000629725 HEATR1Q9H583 2144 aaKnown RBP17.77■□□□□ 0.43
TARDBP-228ENST00000629725 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 OR5H1A6NKK0 313 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 KIF2AO00139 706 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-228ENST00000629725 RGS14O43566 566 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 PGM3O95394 542 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 ACP2P11117 423 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 COX5AP20674 150 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 IMPDH1P20839 514 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 SERPINB4P48594 390 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 FABP6P51161 128 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 PKNOX1P55347 436 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 RAC3P60763 192 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF117Q03924 483 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 LCP2Q13094 533 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 IMPG1Q17R60 797 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 ARL13AQ5H913 290 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-228ENST00000629725 LIPNQ5VXI9 398 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 IKBIPQ70UQ0 350 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 SZRD1Q7Z422 152 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 SLC16A11Q8NCK7 471 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 FAM76AQ8TAV0 307 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 GIMAP5Q96F15 307 aa17.76■□□□□ 0.43
TARDBP-228ENST00000629725 IQCGQ9H095 443 aaKnown RBP17.76■□□□□ 0.43
TARDBP-228ENST00000629725 GPC6Q9Y625 555 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-228ENST00000629725 ESYT3A0FGR9 886 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 SLC35F4A4IF30 521 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 TRIM49D1C9J1S8 452 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 C9JVG2 144 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 PDPK1O15530 556 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 DHRS4L1P0CG22 281 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 HNF1AP20823 631 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 EDNRAP25101 427 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 PTAFRP25105 342 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 SLC7A1P30825 629 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 EFNA4P52798 201 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 RUNX1T1Q06455 604 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 SPOCK1Q08629 439 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 RASGEF1BQ0VAM2 473 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 DUSP5Q16690 384 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 KLHL17Q6TDP4 642 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 MTERF4Q7Z6M4 381 aaKnown RBP17.75■□□□□ 0.43
TARDBP-228ENST00000629725 DEPDC4Q8N2C3 294 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 PHOSPHO1Q8TCT1 267 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF775Q96BV0 537 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-228ENST00000629725 MS4A4EQ96PG1 132 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 FUT8Q9BYC5 575 aa17.75■□□□□ 0.43
TARDBP-228ENST00000629725 LOC100289279A0A1B0GTE1 492 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 BMP4P12644 408 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 CD40P25942 277 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 SQLEQ14534 574 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 CCNJQ5T5M9 372 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 NOXRED1Q6NXP6 359 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 CBLN3Q6UW01 205 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF100Q8IYN0 542 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF433Q8N7K0 673 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-228ENST00000629725 COX18Q8N8Q8 333 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 CIDECQ96AQ7 238 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-228ENST00000629725 EGLN2Q96KS0 407 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF300Q96RE9 604 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-228ENST00000629725 ZDHHC18Q9NUE0 388 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 NTMQ9P121 344 aa17.74■□□□□ 0.43
TARDBP-228ENST00000629725 A0A1W2PNR3 127 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 CYTIPO60759 359 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 RAD51DO75771 328 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 HSPA4LO95757 839 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 PGRP06401 933 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ALOX5P09917 674 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ATP5F1P24539 256 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-228ENST00000629725 CASQ1P31415 396 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF83P51522 516 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 P2RX1P51575 399 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 FOXA1P55317 472 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 SELENBP1Q13228 472 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ZNF544Q6NX49 715 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 ZCCHC12Q6PEW1 402 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 B3GLCTQ6Y288 498 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 SLC22A9Q8IVM8 553 aa17.73■□□□□ 0.43
TARDBP-228ENST00000629725 OR52N5Q8NH56 324 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms