RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 L3MBTL1Q9Y468 752 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 CAPN7Q9Y6W3 813 aa12.67□□□□□ -0.38
SNRPA1-216ENST00000626000 DSPPQ9NZW4 1301 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TRBV5-3A0A0A0MS03 114 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 DVL2O14641 736 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 DNAJA2O60884 412 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TNFRSF21O75509 655 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CRHP06850 196 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 ETFAP13804 333 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 NID1P14543 1247 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 ETS2P15036 469 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 GPX2P18283 190 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CCR4P51679 360 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MAP2K6P52564 334 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CASP9P55211 416 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CLDN18P56856 261 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 NUP107P57740 925 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 RAC1P63000 192 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CHRNEQ04844 493 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 FUT5Q11128 374 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SKP2Q13309 424 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 NFYCQ13952 458 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 CYLC2Q14093 348 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MMEL1Q495T6 779 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC25A53Q5H9E4 307 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 COX20Q5RI15 118 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 GCNT6Q5T4J0 391 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 ESPNLQ6ZVH7 1005 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SPATA21Q7Z572 469 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 ANKFN1Q8N957 763 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 BHLHE22Q8NFJ8 381 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC38A5Q8WUX1 472 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 WDR60Q8WVS4 1066 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC35B4Q969S0 331 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TMEM38AQ9H6F2 299 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 EVA1AQ9H8M9 152 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SERINC1Q9NRX5 453 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 TNFRSF10DQ9UBN6 386 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 AP3M1Q9Y2T2 418 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 SPIN1Q9Y657 262 aaPredicted RBP12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 ARHGAP21Q5T5U3 1957 aa12.66□□□□□ -0.38
SNRPA1-216ENST00000626000 PCNX1Q96RV3 2341 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 H3BML4 177 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 ETV2O00321 342 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 FAAHO00519 579 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 IL18BPO95998 194 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 BCHEP06276 602 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 CHRM4P08173 479 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 LSP1P33241 339 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 HTR3AP46098 478 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 RBBP4Q09028 425 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 KLF10Q13118 480 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 SELENBP1Q13228 472 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 SYPL1Q16563 259 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 TRMT5Q32P41 509 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 PAGE3Q5JUK9 113 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 RNF220Q5VTB9 566 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 RTL6Q6ICC9 239 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 CGB2Q6NT52 195 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 ARSKQ6UWY0 536 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 ADGRE4PQ86SQ3 457 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 GRAMD2AQ8IUY3 354 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 MARVELD2Q8N4S9 558 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 LILRB4Q8NHJ6 448 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 C10orf82Q8WW14 230 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 AURKBQ96GD4 344 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 ANKRD27Q96NW4 1050 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 VAPAQ9P0L0 249 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 RNF6Q9Y252 685 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
SNRPA1-216ENST00000626000 ICE1Q9Y2F5 2266 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 GMNCA6NCL1 334 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 PRORSD1PA6NEY8 169 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 B4DXG7 233 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms