RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 WIPI1Q5MNZ9 446 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ANKRD34AQ69YU3 496 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 FCRL6Q6DN72 434 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 MSANTD1Q6ZTZ1 278 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 CXXC5Q7LFL8 322 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 AQP12AQ8IXF9 295 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 SLC15A3Q8IY34 581 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 LAS2Q8IYD9 372 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OR4K5Q8NGD3 323 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OR51L1Q8NGJ5 315 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 NKD1Q969G9 470 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ABTB1Q969K4 478 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 INTS12Q96CB8 462 aaKnown RBP8.41□□□□□ -1.06
HDAC9-229ENST00000622668 DLGAP2Q9P1A6 1054 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 ACTR3BQ9P1U1 418 aa8.41□□□□□ -1.06
HDAC9-229ENST00000622668 OR5H15A6NDH6 313 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 SUSD5O60279 629 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 UGT2B11O75310 529 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 LCATP04180 440 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FCGR2AP12318 317 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 MYL9P24844 172 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 NAA10P41227 235 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 DUSP5Q16690 384 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OGFOD3Q6PK18 319 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 AHSA2Q719I0 299 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 LILRA2Q8N149 483 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PSD4Q8NDX1 1056 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OSTF1Q92882 214 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PGAM5Q96HS1 289 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 GNRHR2Q96P88 292 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CHMP1AQ9HD42 196 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 RLIMQ9NVW2 624 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ESPL1Q14674 2120 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 GAPDHSO14556 408 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ACOX3O15254 700 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 DNAJB5O75953 348 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FUCA1P04066 466 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CHRM4P08173 479 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ACVR1BP36896 505 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CLDN17P56750 224 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 RHAGQ02094 409 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CDC20Q12834 499 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 GINS1Q14691 196 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 AGERQ15109 404 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ARHGAP11AQ6P4F7 1023 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 UNQ6494/PRO21346Q6UXR6 183 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ZER1Q7Z7L7 766 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PLCZ1Q86YW0 608 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ZZZ3Q8IYH5 903 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 GCNT2Q8N0V5 402 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OR8S1Q8NH09 359 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OR5K1Q8NHB7 308 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FKBP10Q96AY3 582 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FAM173AQ9BQD7 235 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 DPH1Q9BZG8 443 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ITGB1BP2Q9UKP3 347 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PROCRQ9UNN8 238 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 LHX6Q9UPM6 363 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 A0A1B0GVI7 797 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 IRGMA1A4Y4 181 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 UNC119BA6NIH7 251 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PRR19A6NJB7 356 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ANXA2P2A6NMY6 339 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FAM171A2A8MVW0 826 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 F5H5K5 113 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 PLATP00750 562 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 MRPL3P09001 348 aaKnown RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 MSX1P28360 303 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CSF2RBP32927 897 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CDH11P55287 796 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OR12D2P58182 307 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 UGT8Q16880 541 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 SLC36A3Q495N2 470 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FAM71E1Q6IPT2 247 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 RASSF6Q6ZTQ3 369 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 VN1R4Q7Z5H5 301 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CHST4Q8NCG5 386 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 CPT1CQ8TCG5 803 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ADAMTS16Q8TE57 1224 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 APH1AQ96BI3 265 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 FAM46AQ96IP4 442 aaKnown RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 VRK1Q99986 396 aaPredicted RBP8.4□□□□□ -1.06
HDAC9-229ENST00000622668 ZC4H2Q9NQZ6 224 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 KLHL13Q9P2N7 655 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 KLK13Q9UKR3 277 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 OSGIN2Q9Y236 505 aa8.4□□□□□ -1.06
HDAC9-229ENST00000622668 A0A075B6Q4 140 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 TMED7-TICAM2A0A0A6YYA0 188 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 A0A1W2PNR3 127 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 SAGE2PA6NJ88 616 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 SOD1P00441 154 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 TACSTD2P09758 323 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 LIFP15018 202 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 ACP1P24666 158 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 GRPRP30550 384 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 SLC35A1P78382 337 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 GLYR1Q49A26 553 aaPredicted RBP8.4□□□□□ -1.07
HDAC9-229ENST00000622668 JMJD6Q6NYC1 403 aaPredicted RBP8.4□□□□□ -1.07
HDAC9-229ENST00000622668 KCTD18Q6PI47 426 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms