RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TUBBP07437 444 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 MYZAPP0CAP1 466 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 MATN1P21941 496 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 ABCE1P61221 599 aaKnown RBP21.46■■□□□ 1.03
ATXN3-253ENST00000621269 ACKR1Q16570 336 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.46■■□□□ 1.03
ATXN3-253ENST00000621269 SHEQ5VZ18 495 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 C6orf120Q7Z4R8 191 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 TMCO5AQ8N6Q1 288 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 ZNF781Q8N8C0 355 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 RFWD2Q8NHY2 731 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 GPR119Q8TDV5 335 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 ROBO4Q8WZ75 1007 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 CPNE4Q96A23 557 aaPredicted RBP21.46■■□□□ 1.03
ATXN3-253ENST00000621269 SDF2Q99470 211 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 PIP5K1AQ99755 562 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 C12orf49Q9H741 205 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 ZNF395Q9H8N7 513 aaPredicted RBP21.46■■□□□ 1.03
ATXN3-253ENST00000621269 AKTIPQ9H8T0 292 aa21.46■■□□□ 1.03
ATXN3-253ENST00000621269 NPIPB9F8W1W9 429 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 SMPD2O60906 423 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 RPS26P62854 115 aaKnown RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 ZNF844Q08AG5 666 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 NDUFAF6Q330K2 333 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 OR4F3Q6IEY1 312 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 STAC2Q6ZMT1 411 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 C22orf34Q6ZV56 151 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 CXorf67Q86X51 503 aaPredicted RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 P3H2Q8IVL5 708 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 CLECL1Q8IZS7 167 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 TOR1AIP2Q8NFQ8 470 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 GSX1Q9H4S2 264 aaPredicted RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 SSU72Q9NP77 194 aaKnown RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 RAP2CQ9Y3L5 183 aa21.45■■□□□ 1.02
ATXN3-253ENST00000621269 SETD2Q9BYW2 2564 aaPredicted RBP21.45■■□□□ 1.02
ATXN3-253ENST00000621269 TM9SF1O15321 606 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 ZNF264O43296 627 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 EFNA2O43921 213 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 EIF4E2O60573 245 aaKnown RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 SNUPNO95149 360 aaKnown RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 AK1P00568 194 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 UBL4AP11441 157 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 SHC1P29353 583 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 AGTR1P30556 359 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 RNPS1Q15287 305 aaKnown RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 TOMM34Q15785 309 aaPredicted RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 ZNF239Q16600 458 aaKnown RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 TMEM176BQ3YBM2 270 aaPredicted RBP21.44■■□□□ 1.02
ATXN3-253ENST00000621269 TMEM201Q5SNT2 666 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 ATP6V1C2Q8NEY4 427 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 OR4A15Q8NGL6 344 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 OR5W2Q8NH69 310 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 SLC35G5Q96KT7 338 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 MARK4Q96L34 752 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 MRGPRX4Q96LA9 322 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 HS3ST6Q96QI5 342 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 CCL19Q99731 98 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 DPY30Q9C005 99 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 CENPHQ9H3R5 247 aa21.44■■□□□ 1.02
ATXN3-253ENST00000621269 RNF103-CHMP3A0A140T963 221 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 RNASET2O00584 256 aaKnown RBP21.43■■□□□ 1.02
ATXN3-253ENST00000621269 STX11O75558 287 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 THBDP07204 575 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 PRKCAP17252 672 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 SLC1A6P48664 564 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 RPL14P50914 215 aaKnown RBP21.43■■□□□ 1.02
ATXN3-253ENST00000621269 CCR4P51679 360 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 CBFBQ13951 182 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 GPR68Q15743 365 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 BEX5Q5H9J7 111 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 PDZK1Q5T2W1 519 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 C20orf204Q6ZNR8 217 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 KIRREL3Q8IZU9 778 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 LRRC75A-AS1Q8N1F1 130 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 CLEC4FQ8N1N0 589 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 RNF128Q8TEB7 428 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 ARL8AQ96BM9 186 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 PARD6BQ9BYG5 372 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 SRXN1Q9BYN0 137 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 NMUR2Q9GZQ4 415 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 GPR52Q9Y2T5 361 aa21.43■■□□□ 1.02
ATXN3-253ENST00000621269 SERINC4A6NH21 518 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 PRKD3O94806 890 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 ANXA8L1Q5VT79 327 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 C16orf62Q7Z3J2 963 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 BIVMQ86UB2 503 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 VPS37AQ8NEZ2 397 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 OR8J2Q8NGG1 315 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 ZFP90Q8TF47 636 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 ABHD3Q8WU67 409 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 POM121Q96HA1 1249 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 C18orf12Q96KH6 178 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 ACTR6Q9GZN1 396 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 KCNK9Q9NPC2 374 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 EXD2Q9NVH0 621 aa21.42■■□□□ 1.02
ATXN3-253ENST00000621269 CYP7B1O75881 506 aa21.41■■□□□ 1.02
ATXN3-253ENST00000621269 SLC7A1P30825 629 aa21.41■■□□□ 1.02
ATXN3-253ENST00000621269 SELENBP1Q13228 472 aa21.41■■□□□ 1.02
ATXN3-253ENST00000621269 QPRTQ15274 297 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms