RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ELOVL5Q9NYP7 299 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 C6orf203Q9P0P8 240 aaPredicted RBP15.37■□□□□ 0.05
HMGN3-203ENST00000620514 MCTS1Q9ULC4 181 aaKnown RBP15.37■□□□□ 0.05
HMGN3-203ENST00000620514 PCDHGB4Q9UN71 923 aa15.37■□□□□ 0.05
HMGN3-203ENST00000620514 PRSS51A0A1B0GVH4 220 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 TMEM120BA0PK00 339 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 C9JVG2 144 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF195O14628 629 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SIAH2O43255 324 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SS18L1O75177 396 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 GOSR1O95249 250 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 ATE1O95260 518 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SYNGR4O95473 234 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 PLGP00747 810 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 C1QCP02747 245 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 TUBBP07437 444 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 ALDOCP09972 364 aaKnown RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 ME2P23368 584 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 UGT2B10P36537 528 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 EIF1P41567 113 aaKnown RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 PCYT1AP49585 367 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SUMO3P55854 103 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 FGFBP1Q14512 234 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 EXOC3L2Q2M3D2 409 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 CROCCP2Q86T23 111 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 ROBO4Q8WZ75 1007 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 TESCQ96BS2 214 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 GMPPAQ96IJ6 420 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 TEX37Q96LM6 180 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SLC39A3Q9BRY0 314 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SRXN1Q9BYN0 137 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 PAQR5Q9NXK6 330 aaPredicted RBP15.36■□□□□ 0.05
HMGN3-203ENST00000620514 MKLN1Q9UL63 735 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 EMC9Q9Y3B6 208 aa15.36■□□□□ 0.05
HMGN3-203ENST00000620514 SERINC4A6NH21 518 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 DUXAA6NLW8 204 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 C16orf97H3BN30 126 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 RAF1P04049 648 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 OR12D1P0DN82 309 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 PRKCAP17252 672 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 UQCRC2P22695 453 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 CTBP2P56545 445 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 CARD18P57730 90 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 UFM1P61960 85 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 CASP8Q14790 479 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 ARHGAP11BQ3KRB8 267 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 FAM174BQ3ZCQ3 159 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 PDSS1Q5T2R2 415 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 ANXA8L1Q5VT79 327 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 ANKRD34AQ69YU3 496 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 OGFOD2Q6N063 350 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 TNFAIP8L2Q6P589 184 aaPredicted RBP15.35■□□□□ 0.05
HMGN3-203ENST00000620514 C22orf34Q6ZV56 151 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 LRRC34Q8IZ02 419 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 KIRREL3Q8IZU9 778 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 TMCO5AQ8N6Q1 288 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 ATP6V1C2Q8NEY4 427 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 OR6K3Q8NGY3 331 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 MIPOL1Q8TD10 442 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 RAB8BQ92930 207 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 MED18Q9BUE0 208 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 NMUR2Q9GZQ4 415 aa15.35■□□□□ 0.05
HMGN3-203ENST00000620514 WDR55Q9H6Y2 383 aaPredicted RBP15.35■□□□□ 0.05
HMGN3-203ENST00000620514 MARCOQ9UEW3 520 aaPredicted RBP15.35■□□□□ 0.05
HMGN3-203ENST00000620514 ITPR3Q14573 2671 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 GOLGA8QA0A0J9YX86 632 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 GOLGA8OA6NCC3 632 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 DEFB108AA8MXU0 73 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 E9PBE3 544 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 GOLGA8NF8WBI6 632 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF264O43296 627 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 EIF4E2O60573 245 aaKnown RBP15.34■□□□□ 0.05
HMGN3-203ENST00000620514 STX11O75558 287 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 UGT2B17O75795 530 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 NTN1O95631 604 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 AK1P00568 194 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 UBL4AP11441 157 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 NID1P14543 1247 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 ELK4P28324 431 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 IL12AP29459 219 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 S100A3P33764 101 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 CCR4P51679 360 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 CLNS1AP54105 237 aaKnown RBP15.34■□□□□ 0.05
HMGN3-203ENST00000620514 FUT5Q11128 374 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 KEAP1Q14145 624 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 QPRTQ15274 297 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF141Q15928 474 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 MAPK14Q16539 360 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 TMEM176BQ3YBM2 270 aaPredicted RBP15.34■□□□□ 0.05
HMGN3-203ENST00000620514 SAXO2Q658L1 398 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 HEPHL1Q6MZM0 1159 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 C16orf62Q7Z3J2 963 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 OR5W2Q8NH69 310 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 MBD6Q96DN6 1003 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 ZC3HAV1LQ96H79 300 aaKnown RBP15.34■□□□□ 0.05
HMGN3-203ENST00000620514 KLHL4Q9C0H6 718 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 ZNF350Q9GZX5 532 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 COQ10BQ9H8M1 238 aa15.34■□□□□ 0.05
HMGN3-203ENST00000620514 PLSCR4Q9NRQ2 329 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms