RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ACTR6Q9GZN1 396 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 NMUR2Q9GZQ4 415 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 C12orf65Q9H3J6 166 aaKnown RBP10.65□□□□□ -0.71
UPF3B-204ENST00000619445 KLHL9Q9P2J3 617 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 CLEC4AQ9UMR7 237 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 DTNAQ9Y4J8 743 aa10.65□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF195O14628 629 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 HS3ST1O14792 307 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 CFLARO15519 480 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 KLF4O43474 513 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 PEX11AO75192 247 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 PRKD3O94806 890 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 YES1P07947 543 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 LAMP1P11279 417 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 IL32P24001 234 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 LOXP28300 417 aaPredicted RBP10.64□□□□□ -0.71
UPF3B-204ENST00000619445 SLC7A1P30825 629 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 PTH2RP49190 550 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 RAC3P60763 192 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF117Q03924 483 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 CBFBQ13951 182 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 CD226Q15762 336 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 CCNJQ5T5M9 372 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ANKRD34AQ69YU3 496 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 FCRLAQ7L513 359 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ZAR1Q86SH2 424 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 OR7A2PQ8NGA2 310 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 OR5W2Q8NH69 310 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 POC1BQ8TC44 478 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ZFP90Q8TF47 636 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 HSD17B8Q92506 261 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 TUBGCP3Q96CW5 907 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ARSGQ96EG1 525 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 PERPQ96FX8 193 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 Q96MF0 132 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM204Q9BSN7 226 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 DUSP26Q9BV47 211 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ESRP2Q9H6T0 727 aaKnown RBP10.64□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM185BQ9H7F4 350 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF701Q9NV72 531 aaPredicted RBP10.64□□□□□ -0.71
UPF3B-204ENST00000619445 GPATCH2Q9NW75 528 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 ICAM5Q9UMF0 924 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 PCDHGB4Q9UN71 923 aa10.64□□□□□ -0.71
UPF3B-204ENST00000619445 FN1P02751 2386 aaKnown RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 FREM1Q5H8C1 2179 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 ZANQ9Y493 2812 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM233B4DJY2 109 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 H7C1Q1 480 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 ETV2O00321 342 aaPredicted RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF264O43296 627 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SLU7O95391 586 aaKnown RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 CNOT4O95628 575 aaKnown RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 THBDP07204 575 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 GUSBP08236 651 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 UBL4AP11441 157 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 FKBP2P26885 142 aaKnown RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SFTPDP35247 375 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 EMX2Q04743 252 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 FOXF1Q12946 379 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 PTGR1Q14914 329 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SLC25A53Q5H9E4 307 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 IL23RQ5VWK5 629 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 C3orf33Q6P1S2 294 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 EMBQ6PCB8 327 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 VPS37AQ8NEZ2 397 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 FBXO27Q8NI29 283 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 PPP1R14CQ8TAE6 165 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 TCP10LQ8TDR4 215 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 GPR119Q8TDV5 335 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SLC25A43Q8WUT9 341 aaPredicted RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM234Q8WY98 164 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 ST8SIA1Q92185 356 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 PLPPR2Q96GM1 343 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SERINC1Q9NRX5 453 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 EXD2Q9NVH0 621 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 FBXO34Q9NWN3 711 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 ASIC5Q9NY37 505 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 NOP53Q9NZM5 478 aaKnown RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 CARD8Q9Y2G2 431 aa10.63□□□□□ -0.71
UPF3B-204ENST00000619445 SPIN1Q9Y657 262 aaPredicted RBP10.63□□□□□ -0.71
UPF3B-204ENST00000619445 PRR14LQ5THK1 2151 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 NPIPB9F8W1W9 429 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 STX11O75558 287 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 NTN1O95631 604 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 C6orf47O95873 294 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 NID1P14543 1247 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 PRKCAP17252 672 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 CLDN8P56748 225 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 PPP2R2BQ00005 443 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM176BQ3YBM2 270 aaPredicted RBP10.62□□□□□ -0.71
UPF3B-204ENST00000619445 SFRP5Q5T4F7 317 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 ATAD3BQ5T9A4 648 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 TFAP2EQ6VUC0 442 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 RIMKLAQ8IXN7 391 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 LRRC34Q8IZ02 419 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 GABRG1Q8N1C3 465 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms