RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	HCRTR1	O43613	425 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	SSX4	O60224	188 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PSPN	O60542	156 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSC22D2	O75157	780 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF888	P0CJ79	500 aa	Predicted RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	RD3L	P0DJH9	198 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIAL4F	P0DN26	164 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	HSD17B1	P14061	328 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	GFAP	P14136	432 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	FOXA1	P55317	472 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	IL2	P60568	153 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	IFITM3	Q01628	133 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TEK	Q02763	1124 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	KIAA0040	Q15053	153 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRAMEF17	Q5VTA0	474 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	HEPHL1	Q6MZM0	1159 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	HMBOX1	Q6NT76	420 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TAGAP	Q8N103	731 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	UBE2J2	Q8N2K1	259 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ANKRD53	Q8N9V6	530 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	C19orf60	Q96EN9	201 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF382	Q96SR6	550 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	C1QTNF6	Q9BXI9	259 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	LINC00470	Q9BZP3	86 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF160	Q9HCG1	818 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	DMRT3	Q9NQL9	472 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	RSL24D1	Q9UHA3	163 aa	Known RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	CAB39	Q9Y376	341 aa	Predicted RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRAF6	Q9Y4K3	522 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	PRORSD1P	A6NEY8	169 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR6C65	A6NJZ3	312 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	RPL36A-HNRNPH2	H7BZ11	118 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	CLDN4	O14493	209 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	DVL2	O14641	736 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	B3GALT2	O43825	422 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	NRP2	O60462	931 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	NOL3	O60936	208 aa	Known RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ADH4	P08319	380 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	NCF2	P19878	526 aa	Predicted RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	RPS4Y1	P22090	263 aa	Known RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATP5A1	P25705	553 aa	Known RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	MEOX1	P50221	254 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	NUDT2	P50583	147 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	RCAN2	Q14206	197 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	CSHL1	Q14406	222 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ABLIM2	Q6H8Q1	611 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	PAPD4	Q6PIY7	484 aa	Known RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	C5orf46	Q6UWT4	87 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	GFRAL	Q6UXV0	394 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	CCDC36	Q8IYA8	594 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF786	Q8N393	782 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	LILRB2	Q8N423	598 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ANKFN1	Q8N957	763 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF740	Q8NDX6	193 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	GIMAP5	Q96F15	307 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	HBEGF	Q99075	208 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	HGH1	Q9BTY7	390 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	GHITM	Q9H3K2	345 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	EFCAB1	Q9HAE3	211 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	DNAJC11	Q9NVH1	559 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	GALP	Q9UBC7	116 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	FBXL7	Q9UJT9	491 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	SPACA6	W5XKT8	324 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	FRYL	O94915	3013 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	CEP250	Q9BV73	2442 aa		4.9	□□□□□ -1.63
CBWD3-215	ENST00000619322	YLPM1	P49750	1951 aa	Known RBP	4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	C1orf226	A1L170	272 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	ADAMDEC1	O15204	470 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	SIGLEC5	O15389	551 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	TAPBP	O15533	448 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	LRRTM2	O43300	516 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	FADS1	O60427	444 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	DNASE1	P24855	282 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	KIR3DL1	P43629	444 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	RNF4	P78317	190 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	MRPS15	P82914	257 aa	Known RBP	4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	PRR5	P85299	388 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	KCNAB1	Q14722	419 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	LCN8	Q6JVE9	175 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CBLL1	Q75N03	491 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	IGFN1	Q86VF2	1251 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CARM1	Q86X55	608 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	OR2L13	Q8N349	312 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CDYL2	Q8N8U2	506 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMEM52	Q8NDY8	209 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CHTF18	Q8WVB6	975 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	RASL10B	Q96S79	203 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	MYOC	Q99972	504 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CDADC1	Q9BWV3	514 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	POTEKP	Q9BYX7	375 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	WWTR1	Q9GZV5	400 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	TUBA8	Q9NY65	449 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	CIDEB	Q9UHD4	219 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	PFDN2	Q9UHV9	154 aa		4.89	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms