RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SLC22A7Q9Y694 548 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 NPIPA3F8WFD2 350 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 EIF1AYO14602 144 aaKnown RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 ENTPD6O75354 484 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 PPP1R3DO95685 299 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 SPARCP09486 303 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 SSTR4P31391 388 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 KCNJ5P48544 419 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 MAD2L1BPQ15013 274 aaPredicted RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 ABHD17BQ5VST6 288 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 GALNT6Q8NCL4 622 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 ANKK1Q8NFD2 765 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 PRDM9Q9NQV7 894 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 TESQ9UGI8 421 aaKnown RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 MBD1Q9UIS9 605 aaPredicted RBP12.95□□□□□ -0.34
CIITA-213ENST00000618327 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
CIITA-213ENST00000618327 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 PRPS1P60891 318 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 EEF1A2Q05639 463 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 POU4F2Q12837 409 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 CHERPQ8IWX8 916 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 ASCC1Q8N9N2 400 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 NKD1Q969G9 470 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 FXYD6Q9H0Q3 95 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 IKZF5Q9H5V7 419 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 ZNF385DQ9H6B1 395 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 HEMK1Q9Y5R4 338 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 ZNF26P17031 533 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 RPL19P84098 196 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 PDE7AQ13946 482 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 DCAF12Q5T6F0 453 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 SAXO2Q658L1 398 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 RFT1Q96AA3 541 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 ATXN7L1Q9ULK2 861 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 VDAC3Q9Y277 283 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 ADAM23O75077 832 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 GLB1P16278 677 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 PDX1P52945 283 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 ODF4Q2M2E3 257 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 PAQR7Q86WK9 346 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 CPOQ8IVL8 374 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 DDIT4LQ96D03 193 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 TREM1Q9NP99 234 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 MUTYHQ9UIF7 546 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 CDH10Q9Y6N8 788 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 LRRC37A2A6NM11 1700 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 SYT5O00445 386 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 CSF2P04141 144 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 ZNF20P17024 532 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 SLC5A2P31639 672 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 APOFQ13790 326 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 FZD2Q14332 565 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 TRMT12Q53H54 448 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 KCTD18Q6PI47 426 aaPredicted RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 OLIG3Q7RTU3 272 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 BARD1Q99728 777 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 LMF2Q9BU23 707 aaKnown RBP12.94□□□□□ -0.34
CIITA-213ENST00000618327 MCCC2Q9HCC0 563 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
CIITA-213ENST00000618327 NSG1A0A0A6YYJ2 146 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 M0R129 80 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 PYCR1P32322 319 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 OR3A3P47888 321 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 OR3A2P47893 321 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 GFERP55789 205 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 YBX1P67809 324 aaKnown RBP12.93□□□□□ -0.34
CIITA-213ENST00000618327 GAS6Q14393 721 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 PYHIN1Q6K0P9 492 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 HMBOX1Q6NT76 420 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 UBQLNLQ8IYU4 475 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 OR2T4Q8NH00 348 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 SLC46A1Q96NT5 459 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 MMP27Q9H306 513 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 MEMO1Q9Y316 297 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 SIGLEC6O43699 453 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 NSA2O95478 260 aaKnown RBP12.93□□□□□ -0.34
CIITA-213ENST00000618327 GSTT2P0CG29 244 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 STOMP27105 288 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 LEG1Q6P5S2 330 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 LINC01555Q8NAE3 123 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 GATAD2BQ8WXI9 593 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 CTRCQ99895 268 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 WACQ9BTA9 647 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 CSNK1G3Q9Y6M4 447 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 B4GAT1O43505 415 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms