RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
TCF4-248ENST00000616053 F5H697 171 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 GJB5O95377 273 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 OR4C11Q6IEV9 310 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ABHD15Q6UXT9 468 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ZNF597Q96LX8 424 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 C3orf30Q96M34 536 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 IGSF9Q9P2J2 1179 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CDKN2CP42773 168 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 GDF5P43026 501 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CLVS2Q5SYC1 327 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 MAMSTRQ6ZN01 415 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CDKN2AIPNLQ96HQ2 116 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ERVK-25P63136 954 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 OLAHQ9NV23 265 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 PRELID1Q9Y255 219 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ZNF815PA8K554 130 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 RAD1O60671 282 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CHATP28329 748 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 GPR50Q13585 617 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 TGFBIQ15582 683 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ART4Q93070 314 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 MOV10Q9HCE1 1003 aaKnown RBP11.92□□□□□ -0.5
TCF4-248ENST00000616053 SCML2Q9UQR0 700 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CLDN1O95832 211 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 CARD18P57730 90 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 RHOBP62745 196 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 ZNF517Q6ZMY9 492 aaPredicted RBP11.92□□□□□ -0.5
TCF4-248ENST00000616053 GOLGA7Q7Z5G4 137 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 HEYLQ9NQ87 328 aaPredicted RBP11.92□□□□□ -0.5
TCF4-248ENST00000616053 LANCL2Q9NS86 450 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.92□□□□□ -0.5
TCF4-248ENST00000616053 DTX3Q8N9I9 347 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 SLC35E1Q96K37 410 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 STARD5Q9NSY2 213 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
TCF4-248ENST00000616053 DCDC2BA2VCK2 349 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 P2RY2P41231 377 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 CASP7P55210 303 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 UGT3A2Q3SY77 523 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 CYBRD1Q53TN4 286 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 MS4A13Q5J8X5 152 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 PRAMEF20Q5VT98 475 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 OR2T6Q8NHC8 308 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 A0A0B4J203 849 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 SLC22A31A6NKX4 558 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 PRSS56P0CW18 603 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 OR1E2P47887 323 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 TMEM9BQ9NQ34 198 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 C14orf119Q9NWQ9 140 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 GPR4P46093 362 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 ITPAQ9BY32 194 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 A0A0J9YY10 115 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 XKRY2A2RUG3 117 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 SGK494L7N484 410 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 HNRNPA0Q13151 305 aaKnown RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 NKD2Q969F2 451 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 CENPOQ9BU64 300 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 TMEM181Q9P2C4 612 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 INO80Q9ULG1 1556 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 MED6O75586 246 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 GDF10P55107 478 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 ECM1Q16610 540 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 Q6ZRG5 221 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 TRMT61AQ96FX7 289 aaKnown RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 C1QTNF6Q9BXI9 259 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 MTCH1Q9NZJ7 389 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 PROCRQ9UNN8 238 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 RGS9O75916 674 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 CHRNB1P11230 501 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 EPXP11678 715 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 PRPS1P60891 318 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 DCDP81605 110 aaKnown RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 MEDAGQ5VYS4 303 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 DOK3Q7L591 496 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
TCF4-248ENST00000616053 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 NT5DC2Q9H857 520 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 CHST11Q9NPF2 352 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 RNF11Q9Y3C5 154 aa11.91□□□□□ -0.5
TCF4-248ENST00000616053 ZNF716A6NP11 495 aa11.9□□□□□ -0.5
TCF4-248ENST00000616053 HLA-DMAP28067 261 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms