RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 STARP49675 285 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 POU4F2Q12837 409 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 RAET1LQ5VY80 246 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM225Q6GV28 225 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 LACC1Q8IV20 430 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TOR1AIP2Q8NFQ8 470 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 S100A16Q96FQ6 103 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 LRRN3Q9H3W5 708 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 OBP2AQ9NY56 170 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 MKI67P46013 3256 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC16A6O15403 523 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 AQP9O43315 295 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CD2P06729 351 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ACTC1P68032 377 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ACTA1P68133 377 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 GALK2Q01415 458 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 OR7A5Q15622 319 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 DUSP5Q16690 384 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SFRP4Q6FHJ7 346 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SERPINA12Q8IW75 414 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 IL17RCQ8NAC3 791 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 MRGPRX1Q96LB2 322 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TNFRSF13CQ96RJ3 184 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 DIABLOQ9NR28 239 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TBCCD1Q9NVR7 557 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 IGHV3-20A0A0C4DH32 117 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ANKRD28O15084 1053 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 COL9A1P20849 921 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SFTPDP35247 375 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 MAN2A2P49641 1150 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 WNT3P56703 355 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ADAM8P78325 824 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ELOAQ14241 798 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SEC23BQ15437 767 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 Q6ZS52 159 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ZER1Q7Z7L7 766 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 FCAMRQ8WWV6 532 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ACOT11Q8WXI4 607 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TEX101Q9BY14 249 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 GABARAPL1Q9H0R8 117 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 POT1Q9NUX5 634 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 C19orf25Q9UFG5 118 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TRBV11-1A0A0K0K1C0 115 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 H2BFMP0C1H6 154 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 FBXO45P0C2W1 286 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 STOMP27105 288 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TRIM23P36406 574 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ACTA2P62736 377 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ACTG2P63267 376 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TCTE1Q5JU00 501 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 MBOAT2Q6ZWT7 520 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SLC37A2Q8TED4 501 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CTRCQ99895 268 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 NUDT22Q9BRQ3 303 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 FUZQ9BT04 418 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 CRISPLD2Q9H0B8 497 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 TP63Q9H3D4 680 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 ATP13A2Q9NQ11 1180 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 SIRT5Q9NXA8 310 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 RARRES3Q9UL19 164 aa8.32□□□□□ -1.08
PDLIM5-222ENST00000615540 GABRPO00591 440 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 DCNP07585 359 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 SRYQ05066 204 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 RAB40BQ12829 278 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 SRSF5Q13243 272 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 CBFBQ13951 182 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 TBCEQ15813 527 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 TMEM69Q5SWH9 247 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 TP53I13Q8NBR0 393 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 RCBTB1Q8NDN9 531 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 NLGN4YQ8NFZ3 816 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 DIO2Q92813 273 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 OR10A4Q9H209 315 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 PPM1BO75688 479 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 RAB3BP20337 219 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 ETV5P41161 510 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 ETV1P50549 477 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 MFSD12Q6NUT3 480 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 LMF1Q96S06 567 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 DEFB126Q9BYW3 111 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 OR10A5Q9H207 317 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 CD93Q9NPY3 652 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 CCDC59Q9P031 241 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 NCDNQ9UBB6 729 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 NLKQ9UBE8 527 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 SEC14L5O43304 696 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 LAMTOR5O43504 91 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 TLX3O43711 291 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 NDUFB2O95178 105 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 ECDO95905 644 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 PRPH2P23942 346 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 MAP2K3P46734 347 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 KIAA0040Q15053 153 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 MLF2Q15773 248 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 C10orf111Q8N326 155 aa8.31□□□□□ -1.08
PDLIM5-222ENST00000615540 EID2Q8N6I1 236 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms