RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 HSPB3Q12988 150 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 NFATC2Q13469 925 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 LINC00303Q3SY05 128 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 FAM69AQ5T7M9 428 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 CRTC1Q6UUV9 634 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 SSX9Q7RTT3 188 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 TMPRSS11BQ86T26 416 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 L3MBTL4Q8NA19 623 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 SLC38A5Q8WUX1 472 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 SLC25A28Q96A46 364 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZNF607Q96SK3 696 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 ALG8Q9BVK2 526 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 POT1Q9NUX5 634 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 LHX6Q9UPM6 363 aa9.69□□□□□ -0.86
TNFAIP3-208ENST00000615468 ARRDC5A6NEK1 342 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SOCS6O14544 535 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 CLDN7O95471 211 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TACR2P21452 398 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 VEGFBP49765 207 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 PRKAG1P54619 331 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZNF124Q15973 351 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TMEM255AQ5JRV8 349 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GPRC6AQ5T6X5 926 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GLDNQ6ZMI3 551 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SLC24A5Q71RS6 500 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 CPOQ8IVL8 374 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ACBD7Q8N6N7 88 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR13C5Q8NGS8 318 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR51Q1Q8NH59 317 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR5W2Q8NH69 310 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 UBTD2Q8WUN7 234 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ACBD6Q9BR61 282 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR51V1Q9H2C8 321 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR51M1Q9H341 326 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 XKR8Q9H6D3 395 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 DHCR7Q9UBM7 475 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 MAFFQ9ULX9 164 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 CEP290O15078 2479 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GON4LQ3T8J9 2241 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 KRT33AO76009 404 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ACP5P13686 325 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GNSP15586 552 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 NFYBP25208 207 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 NSG1P42857 185 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 MANFP55145 182 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TAS2R41P59536 307 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 FABP9Q0Z7S8 132 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ACSM3Q53FZ2 586 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 CLLU1OSQ5K130 101 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZDHHC20Q5W0Z9 365 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 FAM109BQ6ICB4 259 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 RPTNQ6XPR3 784 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SLC9B2Q86UD5 537 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 IL17RCQ8NAC3 791 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR1S2Q8NGQ3 325 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ELP5Q8TE02 316 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 FCAMRQ8WWV6 532 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GPA33Q99795 319 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 WFDC6Q9BQY6 131 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZNF629Q9UEG4 869 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 BACE2Q9Y5Z0 518 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SIRT4Q9Y6E7 314 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZC3H12DA2A288 527 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 F5H0A9 414 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 FLRT2O43155 660 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GALR3O60755 368 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SC5DO75845 299 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SNAPC5O75971 98 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 CD63P08962 238 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TYRP14679 529 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TIA1P31483 386 aaKnown RBP eCLIP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 PYCR1P32322 319 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 PRR5P85299 388 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZNF177Q13360 481 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 DYRK1AQ13627 763 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 PEA15Q15121 130 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 NDUFA9Q16795 377 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 EOGTQ5NDL2 527 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TMEM71Q6P5X7 295 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SEZ6L2Q6UXD5 910 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 USP53Q70EK8 1073 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 DCUN1D3Q8IWE4 304 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 EIF4E3Q8N5X7 224 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 FAM46AQ96IP4 442 aaKnown RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 LRIG1Q96JA1 1093 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GPR62Q9BZJ7 368 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 SLC38A1Q9H2H9 487 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 TMEM38AQ9H6F2 299 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 GAREM1Q9H706 876 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ACSS1Q9NUB1 689 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 UFSP2Q9NUQ7 469 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OPN4Q9UHM6 478 aa9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ATXN7L1Q9ULK2 861 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 ZFP37Q9Y6Q3 630 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP3-208ENST00000615468 OR2AT4A6NND4 320 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms