RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 ICAM5Q9UMF0 924 aa13.24□□□□□ -0.29
PRKN-211ENST00000615065 ARID1AO14497 2285 aa13.24□□□□□ -0.29
PRKN-211ENST00000615065 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.29
PRKN-211ENST00000615065 FREM1Q5H8C1 2179 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 H3BNH8 94 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 GTPBP1O00178 669 aaKnown RBP13.23□□□□□ -0.29
PRKN-211ENST00000615065 ZNF195O14628 629 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 NID1P14543 1247 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 HOXB4P17483 251 aaPredicted RBP13.23□□□□□ -0.29
PRKN-211ENST00000615065 ATP12AP54707 1039 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 SUMO3P55854 103 aaPredicted RBP13.23□□□□□ -0.29
PRKN-211ENST00000615065 CLDN8P56748 225 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 CARD18P57730 90 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 MAD2L1Q13257 205 aaPredicted RBP13.23□□□□□ -0.29
PRKN-211ENST00000615065 CHI3L2Q15782 390 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 ACKR1Q16570 336 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 KRT71Q3SY84 523 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 GPR119Q8TDV5 335 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 RNF128Q8TEB7 428 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 ABHD3Q8WU67 409 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 SMR3AQ99954 134 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 GLRX2Q9NS18 164 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 NOP53Q9NZM5 478 aaKnown RBP13.23□□□□□ -0.29
PRKN-211ENST00000615065 DTNAQ9Y4J8 743 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
PRKN-211ENST00000615065 KLF4O43474 513 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 SMPD2O60906 423 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 SOX30O94993 753 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 SERPINE1P05121 402 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 TUBBP07437 444 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 PRKCAP17252 672 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 MATN1P21941 496 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 ADH6P28332 368 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 ABCE1P61221 599 aaKnown RBP13.22□□□□□ -0.29
PRKN-211ENST00000615065 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 TMEM176BQ3YBM2 270 aaPredicted RBP13.22□□□□□ -0.29
PRKN-211ENST00000615065 Q5PR19 223 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 PDZK1Q5T2W1 519 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 SHEQ5VZ18 495 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 C6orf120Q7Z4R8 191 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 MREGQ8N565 214 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 TMCO5AQ8N6Q1 288 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 RFWD2Q8NHY2 731 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 PIGTQ969N2 578 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 ARSGQ96EG1 525 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 SDF2Q99470 211 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 CCL19Q99731 98 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 PIP5K1AQ99755 562 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 COQ10BQ9H8M1 238 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 AKTIPQ9H8T0 292 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 GPC6Q9Y625 555 aaPredicted RBP13.22□□□□□ -0.29
PRKN-211ENST00000615065 ROS1P08922 2347 aa13.22□□□□□ -0.29
PRKN-211ENST00000615065 CENPVL1A0A0U1RR11 272 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 RNF103-CHMP3A0A140T963 221 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.21□□□□□ -0.29
PRKN-211ENST00000615065 RGS16O15492 202 aaPredicted RBP13.21□□□□□ -0.29
PRKN-211ENST00000615065 NTN1O95631 604 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 UBL4AP11441 157 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 PPP3CBP16298 524 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 FPR1P21462 350 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 CCR4P51679 360 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 CASP9P55211 416 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 SMU1Q2TAY7 513 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 KRTAP21-3Q3LHN1 58 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 BHLHB9Q6PI77 547 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 BEND4Q6ZU67 534 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.29
PRKN-211ENST00000615065 STK32CQ86UX6 486 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 P3H2Q8IVL5 708 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 OR5W2Q8NH69 310 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 ZFP90Q8TF47 636 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
PRKN-211ENST00000615065 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 REXO5Q96IC2 774 aaKnown RBP13.21□□□□□ -0.29
PRKN-211ENST00000615065 C18orf12Q96KH6 178 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 SLC35G5Q96KT7 338 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 ZIM3Q96PE6 472 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 SORT1Q99523 831 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 ACTR6Q9GZN1 396 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 NMUR2Q9GZQ4 415 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 TIGARQ9NQ88 270 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 KCNE5Q9UJ90 142 aa13.21□□□□□ -0.29
PRKN-211ENST00000615065 IGHV3-15A0A0B4J1V0 119 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 GJE1A6NN92 205 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 ESPNB1AK53 854 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 RNASET2O00584 256 aaKnown RBP13.2□□□□□ -0.3
PRKN-211ENST00000615065 BIRC5O15392 142 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 ZNF264O43296 627 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 ARHGEF9O43307 516 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 FCMRO60667 390 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 INHBBP09529 407 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
PRKN-211ENST00000615065 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
PRKN-211ENST00000615065 QPRTQ15274 297 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms