RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ZNF195O14628 629 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 OIP5O43482 229 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 EFNA2O43921 213 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 PEX11AO75192 247 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 LYPLA1O75608 230 aaPredicted RBP15.84■□□□□ 0.13
SSBP1-215ENST00000612337 PLAUP00749 431 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 KRT16P08779 473 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 TP53BP2Q13625 1128 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 ATP6AP1LQ52LC2 224 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 TMEM201Q5SNT2 666 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 DCST2Q5T1A1 773 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 RIBC1Q8N443 379 aaPredicted RBP15.84■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF611Q8N823 705 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 STEAP2Q8NFT2 490 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 FBXO27Q8NI29 283 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 NUDT8Q8WV74 236 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 MECRQ9BV79 373 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 HDHD5Q9BXW7 423 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 SRXN1Q9BYN0 137 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 CXorf56Q9H5V9 222 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 CXorf36Q9H7Y0 433 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 GP6Q9HCN6 339 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
SSBP1-215ENST00000612337 ATAD3AQ9NVI7 634 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 GPATCH2Q9NW75 528 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 KLHL13Q9P2N7 655 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 FAF1Q9UNN5 650 aaPredicted RBP15.84■□□□□ 0.13
SSBP1-215ENST00000612337 CARD8Q9Y2G2 431 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 FREM1Q5H8C1 2179 aa15.84■□□□□ 0.13
SSBP1-215ENST00000612337 NPIPA5A0A0B4J1W7 369 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 TLDC2A0PJX2 215 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 NPIPA7E9PJI5 369 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 HS3ST1O14792 307 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 GCM2O75603 506 aaPredicted RBP15.83■□□□□ 0.12
SSBP1-215ENST00000612337 NUDT14O95848 222 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 NPIPA8P0DM63 369 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 ATP12AP54707 1039 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 ZNF844Q08AG5 666 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 LSM12Q3MHD2 195 aaKnown RBP15.83■□□□□ 0.12
SSBP1-215ENST00000612337 SPDYE7PQ495Y7 208 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 C6orf136Q5SQH8 315 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.83■□□□□ 0.12
SSBP1-215ENST00000612337 TFAP2EQ6VUC0 442 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 TUSC5Q8IXB3 177 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 GABRG1Q8N1C3 465 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 OR2W6PQ8NHA6 318 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 AGR3Q8TD06 166 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 SFXN5Q8TD22 340 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 GPR119Q8TDV5 335 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 S100PBPQ96BU1 408 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 MOAP1Q96BY2 351 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 COQ8BQ96D53 544 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 PRPF18Q99633 342 aaKnown RBP15.83■□□□□ 0.12
SSBP1-215ENST00000612337 C1orf50Q9BV19 199 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 SLC17A7Q9P2U7 560 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 KCNE3Q9Y6H6 103 aa15.83■□□□□ 0.12
SSBP1-215ENST00000612337 NPIPB9F8W1W9 429 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 PRKD3O94806 890 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 SLU7O95391 586 aaKnown RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 CNOT4O95628 575 aaKnown RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 C6orf47O95873 294 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 PRKCAP17252 672 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 SERPINB5P36952 375 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 RNF144AP50876 292 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 TOMM34Q15785 309 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 TMEM176BQ3YBM2 270 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 ZCCHC23Q6ZST2 131 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 FCRLAQ7L513 359 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 NUFIP2Q7Z417 695 aaKnown RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 RIMKLAQ8IXN7 391 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 KRTCAP2Q8N6L1 136 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 FNDC5Q8NAU1 212 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 ZFP90Q8TF47 636 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 MRGPRX4Q96LA9 322 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 C3orf30Q96M34 536 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 TACO1Q9BSH4 297 aaKnown RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 BHLHE41Q9C0J9 482 aaPredicted RBP15.82■□□□□ 0.12
SSBP1-215ENST00000612337 COQ10BQ9H8M1 238 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 DTNAQ9Y4J8 743 aa15.82■□□□□ 0.12
SSBP1-215ENST00000612337 GTPBP1O00178 669 aaKnown RBP15.81■□□□□ 0.12
SSBP1-215ENST00000612337 NTN1O95631 604 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 YES1P07947 543 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 PRPS1L1P21108 318 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 ARRB2P32121 409 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 SLC25A53Q5H9E4 307 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 SFRP5Q5T4F7 317 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 IL23RQ5VWK5 629 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 ADAM5Q6NVV9 412 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 SLC43A2Q8N370 569 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 TCP10LQ8TDR4 215 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 AKAP1Q92667 903 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSBP1-215ENST00000612337 OR7D2Q96RA2 312 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 ANKZF1Q9H8Y5 726 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 LGALS13Q9UHV8 139 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 ZDHHC2Q9UIJ5 367 aa15.81■□□□□ 0.12
SSBP1-215ENST00000612337 ETV2O00321 342 aaPredicted RBP15.8■□□□□ 0.12
SSBP1-215ENST00000612337 EIF4E2O60573 245 aaKnown RBP15.8■□□□□ 0.12
SSBP1-215ENST00000612337 SPAG7O75391 227 aa15.8■□□□□ 0.12
SSBP1-215ENST00000612337 NUDT17P0C025 328 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms