RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571		A0A087WUU8	490 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	GFY	I3L273	518 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	RBMXL2	O75526	392 aa	Known RBP	12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	HCCS	P53701	268 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	PLK5	Q496M5	336 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	OTP	Q5XKR4	325 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	TMEM64	Q6YI46	380 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	DGLUCY	Q7Z3D6	616 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	FAM46B	Q96A09	425 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	SLC39A1	Q9NY26	324 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	MAFF	Q9ULX9	164 aa		12.96	□□□□□ -0.34
MUC1-223	ENST00000611571	CLEC3A	O75596	197 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	OR7A10	O76100	309 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	NDUFB2	O95178	105 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	HRG	P04196	525 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ZDHHC11B	P0C7U3	371 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ARSB	P15848	533 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	AKR1C4	P17516	323 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	SOX18	P35713	384 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	MMP12	P39900	470 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	XCR1	P46094	333 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ARHGAP11A	Q6P4F7	1023 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	LYPD4	Q6UWN0	246 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	CFAP77	Q6ZQR2	320 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	AMDHD1	Q96NU7	426 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	FN3K	Q9H479	309 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	AKIP1	Q9NQ31	210 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ALKBH4	Q9NXW9	302 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	COL16A1	Q07092	1604 aa	Predicted RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	POLR2A	P24928	1970 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	FOXE1	O00358	373 aa	Predicted RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	AMY2A	P04746	511 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	SFTPB	P07988	381 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	S1PR1	P21453	382 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	RPS15A	P62244	130 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	CTBS	Q01459	385 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	IRF4	Q15306	451 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	OR1Q1	Q15612	314 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	CD300LG	Q6UXG3	332 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	MRPL43	Q8N983	215 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	NXPE3	Q969Y0	559 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	MS4A8	Q9BY19	250 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ALOXE3	Q9BYJ1	711 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	PELI2	Q9HAT8	420 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	RBFOX1	Q9NWB1	397 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	SCP2D1	Q9UJQ7	156 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	WRB	O00258	174 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	POLR1C	O15160	346 aa	Predicted RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ABLIM3	O94929	683 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	VNN2	O95498	520 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	OR8G3P	P0DMU2	310 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	CD22	P20273	847 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	TEAD1	P28347	426 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	P2RY2	P41231	377 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	TSPAN31	Q12999	210 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	FAM27D1	Q5T7N8	215 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	GARNL3	Q5VVW2	1013 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	BEST3	Q8N1M1	668 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	RLN3	Q8WXF3	142 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	SLIRP	Q9GZT3	109 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	POLM	Q9NP87	494 aa	Predicted RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	FZD7	O75084	574 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	RNH1	P13489	461 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	MAK	P20794	623 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ATP5A1	P25705	553 aa	Known RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	OR9A4	Q8NGU2	314 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	NEURL3	Q96EH8	262 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	ZFYVE21	Q9BQ24	234 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	C1GALT1	Q9NS00	363 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	NAALAD2	Q9Y3Q0	740 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	PCDHGB2	Q9Y5G2	931 aa		12.95	□□□□□ -0.34
MUC1-223	ENST00000611571	LRRTM2	O43300	516 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	RFPL3	O75679	317 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ADH1B	P00325	375 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	JUND	P17535	347 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	MAPK3	P27361	379 aa	Predicted RBP	12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	PDX1	P52945	283 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	DCST2	Q5T1A1	773 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	NXNL2	Q5VZ03	156 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	SLC16A12	Q6ZSM3	486 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	SLC29A4	Q7RTT9	530 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	TSTD1	Q8NFU3	115 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	SLC7A6	Q92536	515 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ORAI1	Q96D31	301 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	KLHDC7B	Q96G42	594 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	PKMYT1	Q99640	499 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	PDCD1LG2	Q9BQ51	273 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	CDCP1	Q9H5V8	836 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ZMAT3	Q9HA38	289 aa	Known RBP	12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	SIDT1	Q9NXL6	827 aa	Known RBP	12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	EPHA6	Q9UF33	1036 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ERVK-19	Q9WJR5	959 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	TCRBV21S2A2	A0A5A6	115 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ZNF726	A6NNF4	738 aa		12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.94	□□□□□ -0.34
MUC1-223	ENST00000611571	HR	O43593	1189 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms