RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 OR5D16Q8NGK9 328 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 ACTRT2Q8TDY3 377 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 MARK4Q96L34 752 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 C7orf26Q96N11 449 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 OR52B2Q96RD2 323 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 TM9SF2Q99805 663 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 UBTD1Q9HAC8 227 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 TESMINQ9Y4I5 508 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 USH1CQ9Y6N9 552 aa17.31■□□□□ 0.36
SGMS1-208ENST00000608287 H0Y3Z8 333 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 ZNF195O14628 629 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 IDO1P14902 403 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 CPN1P15169 458 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 UQCRC2P22695 453 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 CHMP24386 653 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 IL12AP29459 219 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 PCYT1AP49585 367 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 MEIOBQ8N635 442 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 C1GALT1C1Q96EU7 318 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 SLCO1B3Q9NPD5 702 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 INTS9Q9NV88 658 aaKnown RBP17.3■□□□□ 0.36
SGMS1-208ENST00000608287 PCNX3Q9H6A9 2034 aa17.3■□□□□ 0.36
SGMS1-208ENST00000608287 IGLV3-32A0A0A0MS00 114 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 NPIPA5A0A0B4J1W7 369 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 DUXAA6NLW8 204 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 NPIPA7E9PJI5 369 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 SASH3O75995 380 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 PGRP06401 933 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 NPIPA8P0DM63 369 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 PTH2RP49190 550 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 LHX2P50458 406 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 AGFG1P52594 562 aaKnown RBP17.29■□□□□ 0.36
SGMS1-208ENST00000608287 CASP9P55211 416 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 B3GALT5-AS1P59052 145 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 PDCD4Q53EL6 469 aaKnown RBP17.29■□□□□ 0.36
SGMS1-208ENST00000608287 LUZP2Q86TE4 346 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 ZPLD1Q8TCW7 415 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 CCDC115Q96NT0 180 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 OR52E6Q96RD3 313 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 TUBA1CQ9BQE3 449 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 SERHL2Q9H4I8 314 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 CXorf56Q9H5V9 222 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 HHATLQ9HCP6 504 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 BTNL2Q9UIR0 455 aa17.29■□□□□ 0.36
SGMS1-208ENST00000608287 UBDO15205 165 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 TLX2O43763 284 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-208ENST00000608287 SLC22A3O75751 556 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 CHI3L1P36222 383 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-208ENST00000608287 GSTA3Q16772 222 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 EPGNQ6UW88 154 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 MISPQ8IVT2 679 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 ZNF527Q8NB42 609 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 GLB1L3Q8NCI6 653 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-208ENST00000608287 OR5M1Q8NGP8 315 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 SH3YL1Q96HL8 342 aaPredicted RBP17.28■□□□□ 0.36
SGMS1-208ENST00000608287 PANX1Q96RD7 426 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 HOXD1Q9GZZ0 328 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 OR51I1Q9H343 314 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 VDAC3Q9Y277 283 aa17.28■□□□□ 0.36
SGMS1-208ENST00000608287 A0A1W2PQD3 144 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 OR2M5A3KFT3 312 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 PAX1P15863 534 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 RNF144AP50876 292 aaPredicted RBP17.27■□□□□ 0.36
SGMS1-208ENST00000608287 CLDN18P56856 261 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 CD226Q15762 336 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 SAXO2Q658L1 398 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 C16orf62Q7Z3J2 963 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 UBQLNLQ8IYU4 475 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 ZNF614Q8N883 585 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 PHOSPHO1Q8TCT1 267 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 TMEM171Q8WVE6 324 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 SDF2Q99470 211 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 PIGQQ9BRB3 760 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 SLC35A5Q9BS91 424 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 EXD2Q9NVH0 621 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 PACSIN3Q9UKS6 424 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 ZNF337Q9Y3M9 751 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 KIAA1549Q9HCM3 1950 aa17.27■□□□□ 0.36
SGMS1-208ENST00000608287 CCDC154A6NI56 674 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 H3BML4 177 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 HAX1O00165 279 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 POLR3GO15318 223 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-208ENST00000608287 TGDSO95455 350 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 AK1P00568 194 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 PEPDP12955 493 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 ZNF708P17019 499 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 ATP12AP54707 1039 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 LRRC74AQ0VAA2 488 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 BCL2A1Q16548 175 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 GLYR1Q49A26 553 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-208ENST00000608287 ATAD3BQ5T9A4 648 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 TNFAIP8L2Q6P589 184 aaPredicted RBP17.26■□□□□ 0.35
SGMS1-208ENST00000608287 PLEKHM3Q6ZWE6 761 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 TRIML2Q8N7C3 387 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 MIPOL1Q8TD10 442 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 XAGE5Q8WWM1 108 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 NEURL3Q96EH8 262 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 PIK3IP1Q96FE7 263 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 INPP5KQ9BT40 448 aa17.26■□□□□ 0.35
SGMS1-208ENST00000608287 ZIM2Q9NZV7 527 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms