RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.34
PRDM16-210ENST00000607632 L3MBTL1Q9Y468 752 aa12.9□□□□□ -0.34
PRDM16-210ENST00000607632 WDR45Q9Y484 360 aa12.9□□□□□ -0.34
PRDM16-210ENST00000607632 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
PRDM16-210ENST00000607632 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 H3BML4 177 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 EDF1O60869 148 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 TNFSF13O75888 250 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 KRT75O95678 551 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 UBL4AP11441 157 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 RPS4Y1P22090 263 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 SSTR2P30874 369 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PGM1P36871 562 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PEX19P40855 299 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PCYT1AP49585 367 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ANXA11P50995 505 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF41P51814 821 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 AQP5P55064 265 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 CASP9P55211 416 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 SKP2Q13309 424 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 GPR68Q15743 365 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 MAPK11Q15759 364 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 BLOC1S3Q6QNY0 202 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 LRRC74BQ6ZQY2 392 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF621Q6ZSS3 439 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 OLIG3Q7RTU3 272 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF619Q8N2I2 560 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 OR5W2Q8NH69 310 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PMM1Q92871 262 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF524Q96C55 264 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ITCHQ96J02 903 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 RNF145Q96MT1 663 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 LAT2Q9GZY6 243 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PAIP1Q9H074 479 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 RMND5AQ9H871 391 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 RNF122Q9H9V4 155 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 STOML1Q9UBI4 398 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 GPC6Q9Y625 555 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
PRDM16-210ENST00000607632 PDZD2O15018 2839 aa12.89□□□□□ -0.35
PRDM16-210ENST00000607632 DSPPQ9NZW4 1301 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 EFNA2O43921 213 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 GMFGO60234 142 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 GSNP06396 782 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 CHRM4P08173 479 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
PRDM16-210ENST00000607632 BMP2P12643 396 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 PRKCAP17252 672 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 RPS3AP61247 264 aaKnown RBP12.88□□□□□ -0.35
PRDM16-210ENST00000607632 FOXF1Q12946 379 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 NDUFAF6Q330K2 333 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 TIGD2Q4W5G0 525 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 COX20Q5RI15 118 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 LRIF1Q5T3J3 769 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 OR2A2Q6IF42 318 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 UBQLNLQ8IYU4 475 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 FIG4Q92562 907 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 ZG16BQ96DA0 208 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 MRGPRX4Q96LA9 322 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF385DQ9H6B1 395 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 EXOSC3Q9NQT5 275 aaKnown RBP12.88□□□□□ -0.35
PRDM16-210ENST00000607632 PAQR5Q9NXK6 330 aaPredicted RBP12.88□□□□□ -0.35
PRDM16-210ENST00000607632 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
PRDM16-210ENST00000607632 A0A1W2PNV4 684 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 GTPBP1O00178 669 aaKnown RBP12.87□□□□□ -0.35
PRDM16-210ENST00000607632 SEC14L5O43304 696 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 H6PDO95479 791 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 IL11P20809 199 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 STX1BP61266 288 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 SORDQ00796 357 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 CHRNEQ04844 493 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-210ENST00000607632 SYPL1Q16563 259 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 GTDC1Q4AE62 458 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 EIF3MQ7L2H7 374 aaKnown RBP12.87□□□□□ -0.35
PRDM16-210ENST00000607632 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 ANKFN1Q8N957 763 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 FNDC9Q8TBE3 224 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 ZNF845Q96IR2 970 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-210ENST00000607632 PINK1Q9BXM7 581 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 PIGMQ9H3S5 423 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
PRDM16-210ENST00000607632 A0A096LPI6 279 aa12.86□□□□□ -0.35
PRDM16-210ENST00000607632 TRBV5-3A0A0A0MS03 114 aa12.86□□□□□ -0.35
PRDM16-210ENST00000607632 A0A0J9YW62 118 aa12.86□□□□□ -0.35
PRDM16-210ENST00000607632 A8MXE2 369 aa12.86□□□□□ -0.35
PRDM16-210ENST00000607632 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-210ENST00000607632 CSTAP01040 98 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms