RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZNF117Q03924 483 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 RAB35Q15286 201 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 DUSP5Q16690 384 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 IMPG1Q17R60 797 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 IKBIPQ70UQ0 350 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 RELL1Q8IUW5 271 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
USE1-208ENST00000600970 FAM76AQ8TAV0 307 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 ZFP90Q8TF47 636 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 RADILQ96JH8 1075 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 CDC42EP4Q9H3Q1 356 aaKnown RBP14.81□□□□□ -0.04
USE1-208ENST00000600970 KLHL9Q9P2J3 617 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 ZNF180Q9UJW8 692 aa14.81□□□□□ -0.04
USE1-208ENST00000600970 PDPK1O15530 556 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 RGS14O43566 566 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 PGM3O95394 542 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 SRD5A1P18405 259 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 GGT1P19440 569 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 COX5AP20674 150 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 ATP5F1P24539 256 aaPredicted RBP14.8□□□□□ -0.04
USE1-208ENST00000600970 PRKAA2P54646 552 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 CCNJQ5T5M9 372 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 ANKRD26P1Q6NSI1 321 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 NOXRED1Q6NXP6 359 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 SSX8Q7RTT4 187 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 ATP6V1C2Q8NEY4 427 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 PHOSPHO1Q8TCT1 267 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 C10orf105Q8TEF2 133 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 FAM168AQ92567 244 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 CIDECQ96AQ7 238 aaPredicted RBP14.8□□□□□ -0.04
USE1-208ENST00000600970 L3HYPDHQ96EM0 354 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 OTUB1Q96FW1 271 aaPredicted RBP14.8□□□□□ -0.04
USE1-208ENST00000600970 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 NTMQ9P121 344 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 NBEAL1Q6ZS30 2694 aa14.8□□□□□ -0.04
USE1-208ENST00000600970 OR5H1A6NKK0 313 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 C9JVG2 144 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 KIF2AO00139 706 aaPredicted RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 OIP5O43482 229 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 NUDT14O95848 222 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 SNRPAP09012 282 aaKnown RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 IGFBP5P24593 272 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 RAC3P60763 192 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 SPOCK1Q08629 439 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 TOMM34Q15785 309 aaPredicted RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 ZNF385BQ569K4 471 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 CBLN3Q6UW01 205 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 IL17RELQ6ZVW7 336 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 SZRD1Q7Z422 152 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 TRIM46Q7Z4K8 759 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 MTERF4Q7Z6M4 381 aaKnown RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 ALPK2Q86TB3 2170 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 P2RY8Q86VZ1 359 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 SLC22A9Q8IVM8 553 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 FBXL14Q8N1E6 418 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 MUC15Q8N387 334 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 PROX1Q92786 737 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 ZNF775Q96BV0 537 aaPredicted RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 C16orf58Q96GQ5 468 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 MS4A4EQ96PG1 132 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 ZNF300Q96RE9 604 aaPredicted RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 GSTO2Q9H4Y5 243 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 MID1IP1Q9NPA3 183 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
USE1-208ENST00000600970 GPC6Q9Y625 555 aaPredicted RBP14.79□□□□□ -0.04
USE1-208ENST00000600970 A0A1W2PNR3 127 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 H7C417 338 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 RSL1D1O76021 490 aaKnown RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 ALOX5P09917 674 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 USF1P22415 310 aaPredicted RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 SERPINB4P48594 390 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 FABP6P51161 128 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 P2RX1P51575 399 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 LSM11P83369 360 aaKnown RBP eCLIP14.78□□□□□ -0.04
USE1-208ENST00000600970 RASGEF1BQ0VAM2 473 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ARL13AQ5H913 290 aaPredicted RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 EXOSC6Q5RKV6 272 aaKnown RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 SLC22A25Q6T423 547 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 TMEM108Q6UXF1 575 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 B3GLCTQ6Y288 498 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ZNF433Q8N7K0 673 aaPredicted RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 COX18Q8N8Q8 333 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ZFP28Q8NHY6 868 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ZNF75CPQ92670 426 aaPredicted RBP14.78□□□□□ -0.04
USE1-208ENST00000600970 ZNF524Q96C55 264 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 POU2F3Q9UKI9 436 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ICAM5Q9UMF0 924 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 CARD8Q9Y2G2 431 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 ACTL7BQ9Y614 415 aa14.78□□□□□ -0.04
USE1-208ENST00000600970 SLC35F4A4IF30 521 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 SMAD9O15198 467 aaKnown RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 CYTIPO60759 359 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 PRKCAP17252 672 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 SLC7A1P30825 629 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 FRKP42685 505 aaPredicted RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 RNF144AP50876 292 aaPredicted RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 SUMO3P55854 103 aaPredicted RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 POU6F2P78424 691 aaPredicted RBP14.77□□□□□ -0.05
USE1-208ENST00000600970 SELENBP1Q13228 472 aa14.77□□□□□ -0.05
USE1-208ENST00000600970 KIAA0040Q15053 153 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms