RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SLC22A7Q9Y694 548 aa18.76■□□□□ 0.59
SHKBP1-225ENST00000600733 ARHGEF17Q96PE2 2063 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 ATG2AQ2TAZ0 1938 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 SGK494L7N484 410 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC19A2O60779 497 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 SAGP10523 405 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 IL9P15248 144 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 ZNF24P17028 368 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 RPS4Y1P22090 263 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 GALP22466 123 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 NOS3P29474 1203 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 RAB25P57735 213 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 OR10A3P58181 314 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 YIF1BQ5BJH7 314 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 PRRT3Q5FWE3 981 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 NUDT18Q6ZVK8 323 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 COX18Q8N8Q8 333 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 TMEM52Q8NDY8 209 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 OR10G6Q8NH81 332 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 NDEL1Q9GZM8 345 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 FN3KQ9H479 309 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 TRIM36Q9NQ86 728 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 TRAV27A0A087WT01 109 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 CDHR4A6H8M9 788 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 LANCL1O43813 399 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 DBIP07108 87 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 LAMP2P13473 410 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 POLR2CP19387 275 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 ACTR1BP42025 376 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 ACTR1AP61163 376 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 E2F1Q01094 437 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 FOXK2Q01167 660 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 GALEQ14376 348 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 EXOSC7Q15024 291 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 TCTE3Q8IZS6 198 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 BPIFA2Q96DR5 249 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 NECTIN4Q96NY8 510 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 MARVELD1Q9BSK0 173 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 HDHD2Q9H0R4 259 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 FBXL4Q9UKA2 621 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 MAU2Q9Y6X3 613 aa18.75■□□□□ 0.59
SHKBP1-225ENST00000600733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 FGF17O60258 216 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 EIF4EP06730 217 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 UGT2B7P16662 529 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 AGFG1P52594 562 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 PLAURQ03405 335 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 TMEM196Q5HYL7 178 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 HBMQ6B0K9 141 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 FCRL6Q6DN72 434 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 SYCE2Q6PIF2 218 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 RPTNQ6XPR3 784 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 CYB561A3Q8NBI2 242 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 OR51A7Q8NH64 312 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 TEAD3Q99594 435 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 TMEM168Q9H0V1 697 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 IGFLR1Q9H665 355 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 PRR23D1E9PI22 279 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 RFPL3O75679 317 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 PAHP00439 452 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 PRR23D2P0DMB1 279 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 TFPIP10646 304 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 NT5EP21589 574 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 NDUFS1P28331 727 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC3A1Q07837 685 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 RNF113BQ8IZP6 322 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 C17orf47Q8NEP4 570 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 OR4M1Q8NGD0 313 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 OR5T3Q8NGG3 340 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 GRHL3Q8TE85 626 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 ACOT12Q8WYK0 555 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 FGF14Q92915 247 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 SLA2Q9H6Q3 261 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 MEPEQ9NQ76 525 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 CMC2Q9NRP2 79 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 MCUBQ9NWR8 336 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 KLHL21Q9UJP4 597 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 ZMIZ1Q9ULJ6 1067 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 SIGLEC7Q9Y286 467 aa18.74■□□□□ 0.59
SHKBP1-225ENST00000600733 FAM86C2PA6NEL3 165 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 ARSBP15848 533 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 RFX3P48380 749 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 FAPQ12884 760 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 ITPRIPL2Q3MIP1 535 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 PARM1Q6UWI2 310 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 ASB18Q6ZVZ8 466 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 ZAR1Q86SH2 424 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 SAMD12Q8N8I0 201 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 OR5M3Q8NGP4 307 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC22A18Q96BI1 424 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 CAPN10Q9HC96 672 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 CD93Q9NPY3 652 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 ENAMQ9NRM1 1142 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 USP36Q9P275 1121 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 RASD1Q9Y272 281 aa18.73■□□□□ 0.59
SHKBP1-225ENST00000600733 GXYLT2A0PJZ3 443 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 CENPBD1B2RD01 187 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 HYAL3O43820 417 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 GYPBP06028 91 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 THBS2P35442 1172 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms