RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 PEX19P40855 299 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 EIF1AXP47813 144 aaKnown RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 RPL14P50914 215 aaKnown RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 AQP5P55064 265 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 NME5P56597 212 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 EEFSECP57772 596 aaKnown RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 SORDQ00796 357 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF117Q03924 483 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 SGCBQ16585 318 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ANKRD46Q86W74 232 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 GOT1L1Q8NHS2 421 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 SFXN5Q8TD22 340 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 OR7D2Q96RA2 312 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 PIGMQ9H3S5 423 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ASIC5Q9NY37 505 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 CARD8Q9Y2G2 431 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
SCAF1-203ENST00000598359 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 A0A087WZY1 265 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 SH3D21A4FU49 640 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 C9JVG2 144 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 CXCL13O43927 109 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 C1QCP02747 245 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 PSMA4P25789 261 aaKnown RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 SHC1P29353 583 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 RASSF2P50749 326 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF41P51814 821 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 C21orf58P58505 322 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 PHC1P78364 1004 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 FOXF1Q12946 379 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 CTU2Q2VPK5 515 aaKnown RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 KLHL26Q53HC5 615 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 OR2A2Q6IF42 318 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF474Q6S9Z5 364 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 MAVSQ7Z434 540 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 C6orf120Q7Z4R8 191 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 CAMKMTQ7Z624 323 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 GTPBP8Q8N3Z3 284 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 OR4A15Q8NGL6 344 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF524Q96C55 264 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 SLC7A6OSQ96CW6 309 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-203ENST00000598359 DPY30Q9C005 99 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 NEUROD4Q9HD90 331 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ST6GALNAC2Q9UJ37 374 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF175Q9Y473 711 aa12.35□□□□□ -0.43
SCAF1-203ENST00000598359 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 A0A0J9YW62 118 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 RNF103-CHMP3A0A140T963 221 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 A0A1W2PPR1 153 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 TNFSF11O14788 317 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MSTNO14793 375 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 CPSF4O95639 269 aaKnown RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 NUDT14O95848 222 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 CRHP06850 196 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 LINGO3P0C6S8 592 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF17P17021 662 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MATN1P21941 496 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 LCN1P31025 176 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 SFTPDP35247 375 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 RPS3AP61247 264 aaKnown RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 RIPK1Q13546 671 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 TOMM34Q15785 309 aaPredicted RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 SMU1Q2TAY7 513 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 LSRQ86X29 649 aaPredicted RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MISPQ8IVT2 679 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 KIRREL3Q8IZU9 778 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 NATD1Q8N6N6 113 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 ZNF610Q8N9Z0 462 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 ACTRT2Q8TDY3 377 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 ZBTB8AQ96BR9 441 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MOAP1Q96BY2 351 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 ADGRG7Q96K78 797 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 SLC35G5Q96KT7 338 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MARCOQ9UEW3 520 aaPredicted RBP12.34□□□□□ -0.43
SCAF1-203ENST00000598359 MPDZO75970 2070 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 NPIPB9F8W1W9 429 aa12.33□□□□□ -0.44
SCAF1-203ENST00000598359 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms