RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TRIM64CA6NLI5 447 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 H3BNH8 94 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 SMPD2O60906 423 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 AIFM1O95831 613 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 SERPIND1P05546 499 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 SLC35G6P0C7Q6 338 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 FPR1P21462 350 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 BMP5P22003 454 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 NTSP30990 170 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ALDH9A1P49189 494 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ASCL1P50553 236 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 CDK9P50750 372 aaKnown RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 MANFP55145 182 aaKnown RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 SELENOWP63302 87 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 VLDLRP98155 873 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 CDK6Q00534 326 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 PLGLB1Q02325 96 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 SLAMF1Q13291 335 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 RFX4Q33E94 735 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 RIPPLY2Q5TAB7 128 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 STK32CQ86UX6 486 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ARMC10Q8N2F6 343 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 TMEM156Q8N614 296 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 LINC01560Q8TB33 94 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 EXOSC8Q96B26 276 aaKnown RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 MOAP1Q96BY2 351 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 PEX11GQ96HA9 241 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 AMDHD1Q96NU7 426 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 CNPPD1Q9BV87 410 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 TIMMDC1Q9NPL8 285 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 FOXD3Q9UJU5 478 aaPredicted RBP11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ACAD8Q9UKU7 415 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ABCG2Q9UNQ0 655 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.53
SCAF1-202ENST00000595242 ABCA1O95477 2261 aa11.71□□□□□ -0.54
SCAF1-202ENST00000595242 A0A0G2JN53 185 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 A0A1B0GVC2 190 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 URADA6NGE7 173 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 HSPB2A8KAH6 182 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 GNGT2O14610 69 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 DVL2O14641 736 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 B4GALT2O60909 372 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 H6PDO95479 791 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 IFNA14P01570 189 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 IGHG3P01860 377 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 CERS1P27544 350 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 POU4F3Q15319 338 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 HSPB2Q16082 182 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 FBXL19-AS1Q494R0 122 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 KRT80Q6KB66 452 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 TSEN54Q7Z6J9 526 aaKnown RBP11.7□□□□□ -0.54
SCAF1-202ENST00000595242 VTCN1Q7Z7D3 282 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 TMEM179BQ7Z7N9 219 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 CAMKVQ8NCB2 501 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 NFKBIDQ8NI38 313 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 MIPOL1Q8TD10 442 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 MAL2Q969L2 176 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 TAMM41Q96BW9 452 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 MACROD1Q9BQ69 325 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 YTHDF1Q9BYJ9 559 aaKnown RBP11.7□□□□□ -0.54
SCAF1-202ENST00000595242 DEFB126Q9BYW3 111 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 TTTY12Q9BZ98 90 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 GLIPR2Q9H4G4 154 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 ANKHQ9HCJ1 492 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 PHF11Q9UIL8 331 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 ATG4BQ9Y4P1 393 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 ANK2Q01484 3957 aa11.7□□□□□ -0.54
SCAF1-202ENST00000595242 A0A1W2PPR1 153 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 AQP7O14520 342 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 RDH16O75452 317 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 ITGA10O75578 1167 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 GOSR1O95249 250 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 SNAP29O95721 258 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 F12P00748 615 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 HRGP04196 525 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 IFI6P09912 130 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 PABPC4LP0CB38 370 aaKnown RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 BMP7P18075 431 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 PRIM2P49643 509 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TUBA4AP68366 448 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TNFRSF17Q02223 184 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 HSPB3Q12988 150 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 IFI44LQ53G44 452 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 OTUD3Q5T2D3 398 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 REEP3Q6NUK4 255 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 ANGPTL8Q6UXH0 198 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 TRILQ7L0X0 811 aa11.69□□□□□ -0.54
SCAF1-202ENST00000595242 C6orf120Q7Z4R8 191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms