RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZNF44P15621 663 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 MX1P20591 662 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 UCP1P25874 307 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 HLA-FP30511 346 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 MMP12P39900 470 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 GRIA1P42261 906 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 NPBWR1P48145 328 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 POU3F4P49335 361 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CCT3P49368 545 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 DNA2P51530 1060 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CCNG1P51959 295 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ARHGDIAP52565 204 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 DAOAP59103 153 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 RPS15P62841 145 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 XIAPP98170 497 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 FOLH1Q04609 750 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 KDSRQ06136 332 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ILF2Q12905 390 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SLAQ13239 276 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 DGCR6Q14129 220 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 DMC1Q14565 340 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 PRAMEF7Q5VXH5 474 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 LYSMD4Q5XG99 296 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SPECC1LQ69YQ0 1117 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 FAM173BQ6P4H8 233 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 FRA10AC1Q70Z53 315 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 LUZP2Q86TE4 346 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ITPRIPQ8IWB1 547 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 AQP12AQ8IXF9 295 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SLC37A3Q8NCC5 494 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 OR4C5Q8NGB2 326 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 OR13F1Q8NGS4 319 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 NDNFQ8TB73 568 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 FAM81AQ8TBF8 368 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TRMT10AQ8TBZ6 339 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 MAPK15Q8TD08 544 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 EMG1Q92979 244 aaKnown RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TSACCQ96A04 125 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 OPTNQ96CV9 577 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF486Q96H40 463 aaPredicted RBP4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TAAR6Q96RI8 345 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 ATG101Q9BSB4 218 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SYT11Q9BT88 431 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 IL22Q9GZX6 179 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM185BQ9H7F4 350 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 MED20Q9H944 212 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 RNF14Q9UBS8 474 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CYTH4Q9UIA0 394 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 CACNA1HO95180 2353 aa4.2□□□□□ -1.74
SMAD4-216ENST00000593223 SPTBN2O15020 2390 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 A0A0U1RQV5 110 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ANKRD30BLA7E2S9 258 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SLC28A1O00337 649 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RNF13O43567 381 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CALUO43852 315 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ACSL4O60488 711 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SDC3O75056 442 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SAP30O75446 220 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CABYRO75952 493 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 LUC7L3O95232 432 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 AHSA1O95433 338 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TBX6O95947 436 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ALPIP09923 528 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RRASP10301 218 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 PNMTP11086 282 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 DBTP11182 482 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 MARCKSP29966 332 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 PRDX6P30041 224 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 FCGR2BP31994 310 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ADRA1AP35348 466 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 DLSTP36957 453 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 OPRL1P41146 370 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CRATP43155 626 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RAB9AP51151 201 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 STX17P56962 302 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 DLK1P80370 383 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 BST1Q10588 318 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 FADDQ13158 208 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 CASP8Q14790 479 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ZNF74Q16587 644 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 POM121L1PQ3SYA9 428 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TEX44Q53QW1 395 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SAPCD1Q5SSQ6 148 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RAET1LQ5VY80 246 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SNRNP48Q6IEG0 339 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 TMEM26Q6ZUK4 368 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 GPRIN3Q6ZVF9 776 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 EIF3MQ7L2H7 374 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 COPS6Q7L5N1 327 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ST13P4Q8IZP2 240 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 GCNT2Q8N0V5 402 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 ENKURQ8TC29 256 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 GPX8Q8TED1 209 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 APOBEC4Q8WW27 367 aaKnown RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 SEPT8Q92599 483 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RAB1CQ92928 201 aa4.19□□□□□ -1.74
SMAD4-216ENST00000593223 KIAA1143Q96AT1 154 aaPredicted RBP4.19□□□□□ -1.74
SMAD4-216ENST00000593223 RBM41Q96IZ5 413 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms