RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RANBP3LQ86VV4 465 aaPredicted RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 ZNF440Q8IYI8 595 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 PRR22Q8IZ63 422 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 HS3ST5Q8IZT8 346 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ARMC10Q8N2F6 343 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 IL22RA1Q8N6P7 574 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 SLC22A8Q8TCC7 542 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 GIPC3Q8TF64 312 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 CNOT9Q92600 299 aaKnown RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 IP6K3Q96PC2 410 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ALPK1Q96QP1 1244 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 BARD1Q99728 777 aaKnown RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 PSD2Q9BQI7 771 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 OSBPL11Q9BXB4 747 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ANKRD19PQ9H560 264 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 DNAJB12Q9NXW2 375 aaKnown RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 TESQ9UGI8 421 aaKnown RBP12.35□□□□□ -0.43
VMP1-217ENST00000593168 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 RAB26Q9ULW5 256 aa12.35□□□□□ -0.43
VMP1-217ENST00000593168 ALG1L2C9J202 215 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 H3BNH8 94 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 DLGAP1O14490 977 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ZNF354AO60765 605 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 ICOSLGO75144 302 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 UGT2B11O75310 529 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 CYP7B1O75881 506 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 CSTAP01040 98 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 THRBP10828 461 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ANXA8P13928 327 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 UQCRBP14927 111 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 PRKACGP22612 351 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ST3GAL3Q11203 375 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 EPS8Q12929 822 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 RFX4Q33E94 735 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 NHSL2Q5HYW2 709 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ENTPD8Q5MY95 495 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 DCST1Q5T197 706 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 WLSQ5T9L3 541 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 FAHD1Q6P587 224 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 LYPD8Q6UX82 237 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 C16orf47Q6ZP98 133 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 TSPYL5Q86VY4 417 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 OR10G2Q8NGC3 310 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 OR52J3Q8NH60 311 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 THAP3Q8WTV1 239 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 ZNF559Q9BR84 538 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 FUZQ9BT04 418 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 ZBTB20Q9HC78 741 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 EXOSC3Q9NQT5 275 aaKnown RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 SMPD3Q9NY59 655 aaPredicted RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 RHCGQ9UBD6 479 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 UTP20O75691 2785 aaKnown RBP12.34□□□□□ -0.43
VMP1-217ENST00000593168 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
VMP1-217ENST00000593168 FAAHO00519 579 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 DENRO43583 198 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 FADS1O60427 444 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 BCAS1O75363 584 aaPredicted RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 CCNB2O95067 398 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 SERPINA7P05543 415 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 FBXO45P0C2W1 286 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 GKN3PP0CG01 181 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 GP1BBP13224 206 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 PRG2P13727 222 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 ELAVL4P26378 380 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 ACAA2P42765 397 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 TMED10P49755 219 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 CLK3P49761 638 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 DAPP51397 102 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 RAD23AP54725 363 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 CHAF1BQ13112 559 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 IL10RAQ13651 578 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 TRAM2Q15035 370 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 OR1Q1Q15612 314 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 IGFBP7Q16270 282 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 KDM4DQ6B0I6 523 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 APOOLQ6UXV4 268 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 PLEKHM3Q6ZWE6 761 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 MRGPREQ86SM8 312 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 RPS19BP1Q86WX3 136 aaKnown RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 ADAMTS16Q8TE57 1224 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 HGDQ93099 445 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 KIAA1143Q96AT1 154 aaPredicted RBP12.33□□□□□ -0.44
VMP1-217ENST00000593168 TMCO6Q96DC7 493 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 Q9H521 79 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
VMP1-217ENST00000593168 MAN2C1Q9NTJ4 1040 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms