RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SLC7A2P52569 658 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 GFRA1P56159 465 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 CRYZQ08257 329 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 KRT72Q14CN4 511 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 C3AR1Q16581 482 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 VMACQ2NL98 169 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 PLPPR5Q32ZL2 321 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 GLYR1Q49A26 553 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF311Q5JNZ3 666 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 RNF220Q5VTB9 566 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 VASNQ6EMK4 673 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 C8orf82Q6P1X6 216 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ERICH5Q6P6B1 374 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ENPP6Q6UWR7 440 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ZNF836Q6ZNA1 936 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 CNOT9Q92600 299 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ZBTB8AQ96BR9 441 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ARSGQ96EG1 525 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 REXO5Q96IC2 774 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 PIGQQ9BRB3 760 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 UGT2B28Q9BY64 529 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 DNAJB12Q9NXW2 375 aaKnown RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 TINAGQ9UJW2 476 aa13.53□□□□□ -0.24
DDX39A-221ENST00000593026 GPC6Q9Y625 555 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-221ENST00000593026 DNAJC13O75165 2243 aa13.52□□□□□ -0.24
DDX39A-221ENST00000593026 CDHR4A6H8M9 788 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PRORSD1PA6NEY8 169 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 FAM220BPB1ANY3 271 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 SERPINB7O75635 380 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 LINGO3P0C6S8 592 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 ESRRAP11474 423 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-221ENST00000593026 ZNF17P17021 662 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PGCP20142 388 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 CA7P43166 264 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 SLC6A8P48029 635 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 MNAT1P51948 309 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PCBP3P57721 371 aaKnown RBP13.52□□□□□ -0.25
DDX39A-221ENST00000593026 B3GALT5-AS1P59052 145 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PSME3P61289 254 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 EEF1A1P68104 462 aaKnown RBP13.52□□□□□ -0.25
DDX39A-221ENST00000593026 MXRA7P84157 204 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PLAURQ03405 335 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 INTS11Q5TA45 600 aaKnown RBP13.52□□□□□ -0.25
DDX39A-221ENST00000593026 C1QL3Q5VWW1 255 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 SLC15A3Q8IY34 581 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PM20D2Q8IYS1 436 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 OR2T12Q8NG77 320 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 OR5M9Q8NGP3 310 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 OR5M1Q8NGP8 315 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 GPR119Q8TDV5 335 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 ZNF583Q96ND8 569 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 TIMP4Q99727 224 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PNPLA3Q9NST1 481 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 ESPL1Q14674 2120 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 TENM4Q6N022 2769 aa13.52□□□□□ -0.25
DDX39A-221ENST00000593026 PCNX3Q9H6A9 2034 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 OR2M5A3KFT3 312 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 C7orf72A4D263 438 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 FIGNL2A6NMB9 653 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 SHISA8B8ZZ34 492 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 LINC01387J3KSC0 135 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 NME4O00746 187 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 DNAJA2O60884 412 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 PRKAR1BP31321 381 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 RYKP34925 604 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 EIF1P41567 113 aaKnown RBP13.51□□□□□ -0.25
DDX39A-221ENST00000593026 LIPEQ05469 1076 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 FOXF1Q12946 379 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 QPRTQ15274 297 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 TOMM34Q15785 309 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-221ENST00000593026 TMEM44Q2T9K0 475 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 GXYLT1Q4G148 440 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 C4orf17Q53FE4 359 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 DCST1Q5T197 706 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 ZNF585AQ6P3V2 769 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 PATL1Q86TB9 770 aaKnown RBP13.51□□□□□ -0.25
DDX39A-221ENST00000593026 DOLPP1Q86YN1 238 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 ARMC8Q8IUR7 673 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 ZNF440Q8IYI8 595 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 GTPBP8Q8N3Z3 284 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-221ENST00000593026 NSL1Q96IY1 281 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 TP63Q9H3D4 680 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-221ENST00000593026 SPAG4Q9NPE6 437 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
DDX39A-221ENST00000593026 A0A1B0GUH1 482 aa13.5□□□□□ -0.25
DDX39A-221ENST00000593026 ELOVL7A1L3X0 281 aa13.5□□□□□ -0.25
DDX39A-221ENST00000593026 CFAP73A6NFT4 308 aa13.5□□□□□ -0.25
DDX39A-221ENST00000593026 H3BML4 177 aa13.5□□□□□ -0.25
DDX39A-221ENST00000593026 M0QX08 132 aa13.5□□□□□ -0.25
DDX39A-221ENST00000593026 UQCRBP14927 111 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms