RNA–Protein interactions for RNA: ENST00000592662.5

FARSA-209, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 1 (best)

Gene FARSA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-209ENST00000592662 LIME1Q9H400 295 aa17.21■□□□□ 0.35
FARSA-209ENST00000592662 RNF122Q9H9V4 155 aa17.21■□□□□ 0.35
FARSA-209ENST00000592662 TMEM45AQ9NWC5 275 aa17.21■□□□□ 0.35
FARSA-209ENST00000592662 ZNF175Q9Y473 711 aa17.21■□□□□ 0.35
FARSA-209ENST00000592662 KCNE3Q9Y6H6 103 aa17.21■□□□□ 0.35
FARSA-209ENST00000592662 A0A087WZY1 265 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 C7orf72A4D263 438 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 SCDO00767 359 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
FARSA-209ENST00000592662 CPA2P48052 419 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 VWA1Q6PCB0 445 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 BLOC1S3Q6QNY0 202 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 SPATA21Q7Z572 469 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 CDC20BQ86Y33 519 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 MISPQ8IVT2 679 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 GTPBP8Q8N3Z3 284 aaPredicted RBP17.2■□□□□ 0.34
FARSA-209ENST00000592662 OR5AK3PQ8NH89 298 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 FNDC9Q8TBE3 224 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 SMPDL3BQ92485 455 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 VPS33AQ96AX1 596 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 PANX1Q96RD7 426 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 ZNF385DQ9H6B1 395 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 RMND5AQ9H871 391 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 MED17Q9NVC6 651 aa17.2■□□□□ 0.34
FARSA-209ENST00000592662 PRRC2AP48634 2157 aaKnown RBP17.19■□□□□ 0.34
FARSA-209ENST00000592662 CCDC154A6NI56 674 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 MSTNO14793 375 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 HPGDP15428 266 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 UQCRC2P22695 453 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 IST1P53990 364 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 RPS3AP61247 264 aaKnown RBP17.19■□□□□ 0.34
FARSA-209ENST00000592662 PON3Q15166 354 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 GUSBP1Q15486 140 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 PLPPR5Q32ZL2 321 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 TIGD2Q4W5G0 525 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 DCST2Q5T1A1 773 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 BHLHB9Q6PI77 547 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 MSANTD1Q6ZTZ1 278 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 BTLAQ7Z6A9 289 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 CLEC4FQ8N1N0 589 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 ZBTB8AQ96BR9 441 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 SPDL1Q96EA4 605 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 SH3YL1Q96HL8 342 aaPredicted RBP17.19■□□□□ 0.34
FARSA-209ENST00000592662 ITCHQ96J02 903 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 ADGRG7Q96K78 797 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 INPP5KQ9BT40 448 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 SERHL2Q9H4I8 314 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 FAF1Q9UNN5 650 aaPredicted RBP17.19■□□□□ 0.34
FARSA-209ENST00000592662 VPS13CQ709C8 3753 aa17.19■□□□□ 0.34
FARSA-209ENST00000592662 NPIPB9F8W1W9 429 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 NR5A2O00482 541 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 RFXANKO14593 260 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 SOX30O94993 753 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 CGAP01215 116 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 KRT16P08779 473 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 PCYT1AP49585 367 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 CTU2Q2VPK5 515 aaKnown RBP17.18■□□□□ 0.34
FARSA-209ENST00000592662 KLHL26Q53HC5 615 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.18■□□□□ 0.34
FARSA-209ENST00000592662 ZNF621Q6ZSS3 439 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 C6orf120Q7Z4R8 191 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 CNEP1R1Q8N9A8 125 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 B4GALNT2Q8NHY0 566 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 POC1BQ8TC44 478 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 NINJ1Q92982 152 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 DACH2Q96NX9 599 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 OR7D2Q96RA2 312 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 MRGBPQ9NV56 204 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 ST6GALNAC2Q9UJ37 374 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 MTORP42345 2549 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 HEATR5AQ86XA9 2040 aa17.18■□□□□ 0.34
FARSA-209ENST00000592662 NPIPA5A0A0B4J1W7 369 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 RNF103-CHMP3A0A140T963 221 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 NPIPA7E9PJI5 369 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 EIF1AYO14602 144 aaKnown RBP17.17■□□□□ 0.34
FARSA-209ENST00000592662 OIP5O43482 229 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 SNX3O60493 162 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 SMNDC1O75940 238 aaKnown RBP eCLIP17.17■□□□□ 0.347e-6■□□□□ 9.1
FARSA-209ENST00000592662 AQP8O94778 261 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 GSNP06396 782 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 LINGO3P0C6S8 592 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 NPIPA8P0DM63 369 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 CD1EP15812 388 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 ATP6V1C1P21283 382 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 MATN1P21941 496 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 CDKN2CP42773 168 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 ZNF41P51814 821 aaPredicted RBP17.17■□□□□ 0.34
FARSA-209ENST00000592662 ART1P52961 327 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 SIRPAP78324 504 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 ZNF117Q03924 483 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 ZNF474Q6S9Z5 364 aaPredicted RBP17.17■□□□□ 0.34
FARSA-209ENST00000592662 CBLN3Q6UW01 205 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 MTERF4Q7Z6M4 381 aaKnown RBP17.17■□□□□ 0.34
FARSA-209ENST00000592662 TRIML2Q8N7C3 387 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 OR5D16Q8NGK9 328 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 RNF145Q96MT1 663 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 HOXD1Q9GZZ0 328 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 SLC52A3Q9NQ40 469 aa17.17■□□□□ 0.34
FARSA-209ENST00000592662 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms